ENSG00000111371


Homo sapiens

Features
Gene ID: ENSG00000111371
  
Biological name :SLC38A1
  
Synonyms : Q9H2H9 / SLC38A1 / solute carrier family 38 member 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: q13.11
Gene start: 46183063
Gene end: 46270017
  
Corresponding Affymetrix probe sets: 218237_s_at (Human Genome U133 Plus 2.0 Array)   224579_at (Human Genome U133 Plus 2.0 Array)   224580_at (Human Genome U133 Plus 2.0 Array)   236857_at (Human Genome U133 Plus 2.0 Array)   242367_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000449756
Ensembl peptide - ENSP00000449744
Ensembl peptide - ENSP00000478907
Ensembl peptide - ENSP00000381634
Ensembl peptide - ENSP00000398142
Ensembl peptide - ENSP00000447853
Ensembl peptide - ENSP00000449607
NCBI entrez gene - 81539     See in Manteia.
OMIM - 608490
RefSeq - XM_017019990
RefSeq - NM_001077484
RefSeq - NM_001278387
RefSeq - NM_001278388
RefSeq - NM_001278389
RefSeq - NM_001278390
RefSeq - NM_030674
RefSeq - XM_011538784
RefSeq - XM_011538786
RefSeq - XM_011538787
RefSeq Peptide - NP_001070952
RefSeq Peptide - NP_001265318
RefSeq Peptide - NP_001265319
RefSeq Peptide - NP_109599
RefSeq Peptide - NP_001265316
RefSeq Peptide - NP_001265317
swissprot - F8VX04
swissprot - F8VX12
swissprot - Q9H2H9
swissprot - A0A024R124
Ensembl - ENSG00000111371
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC38A1ENSGALG00000009698Gallus gallus
 Q8K2P7ENSMUSG00000023169Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q969I6 / SLC38A4 / solute carrier family 38 member 4ENSG0000013920948
Q96QD8 / SLC38A2 / solute carrier family 38 member 2ENSG0000013429448
Q99624 / SLC38A3 / solute carrier family 38 member 3ENSG0000018833846
Q8WUX1 / SLC38A5 / solute carrier family 38 member 5ENSG0000001748342
Q8IZM9 / SLC38A6 / solute carrier family 38 member 6ENSG0000013997436
Q08AI6 / SLC38A11 / solute carrier family 38 member 11ENSG0000016950719
Q9HBR0 / SLC38A10 / solute carrier family 38 member 10ENSG0000015763716


Protein motifs (from Interpro)
Interpro ID Name
 IPR013057  Amino acid transporter, transmembrane domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001504 neurotransmitter uptake TAS
 biological_processGO:0003333 amino acid transmembrane transport IBA
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006814 sodium ion transport IEA
 biological_processGO:0006865 amino acid transport TAS
 biological_processGO:0006868 glutamine transport IEA
 biological_processGO:0007565 female pregnancy IEA
 biological_processGO:0015804 neutral amino acid transport NAS
 biological_processGO:1902475 L-alpha-amino acid transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030424 axon IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005283 amino acid:sodium symporter activity NAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0015171 amino acid transmembrane transporter activity TAS
 molecular_functionGO:0015175 neutral amino acid transmembrane transporter activity NAS
 molecular_functionGO:0015179 L-amino acid transmembrane transporter activity TAS
 molecular_functionGO:0015186 L-glutamine transmembrane transporter activity IEA
 molecular_functionGO:0015293 symporter activity IEA


Pathways (from Reactome)
Pathway description
Astrocytic Glutamate-Glutamine Uptake And Metabolism
Amino acid transport across the plasma membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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