ENSG00000111817


Homo sapiens

Features
Gene ID: ENSG00000111817
  
Biological name :DSE
  
Synonyms : dermatan sulfate epimerase / DSE / Q9UL01
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: 1
Band: q22.1
Gene start: 116254173
Gene end: 116444860
  
Corresponding Affymetrix probe sets: 1557560_at (Human Genome U133 Plus 2.0 Array)   1558867_at (Human Genome U133 Plus 2.0 Array)   1558868_a_at (Human Genome U133 Plus 2.0 Array)   218854_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000495970
Ensembl peptide - ENSP00000332151
Ensembl peptide - ENSP00000352567
Ensembl peptide - ENSP00000397597
Ensembl peptide - ENSP00000404049
Ensembl peptide - ENSP00000494147
Ensembl peptide - ENSP00000494202
Ensembl peptide - ENSP00000495184
Ensembl peptide - ENSP00000495885
NCBI entrez gene - 29940     See in Manteia.
OMIM - 605942
RefSeq - XM_017010797
RefSeq - NM_001080976
RefSeq - NM_001322937
RefSeq - NM_001322938
RefSeq - NM_001322939
RefSeq - NM_001322940
RefSeq - NM_001322941
RefSeq - NM_001322943
RefSeq - NM_001322944
RefSeq - NM_013352
RefSeq - XM_017010795
RefSeq - XM_017010796
RefSeq Peptide - NP_001309867
RefSeq Peptide - NP_001309869
RefSeq Peptide - NP_001309870
RefSeq Peptide - NP_001309872
RefSeq Peptide - NP_001309873
RefSeq Peptide - NP_037484
RefSeq Peptide - NP_001309866
RefSeq Peptide - NP_001309868
RefSeq Peptide - NP_001074445
swissprot - Q9UL01
swissprot - X6REM1
Ensembl - ENSG00000111817
  
Related genetic diseases (OMIM): 615539 - Ehlers-Danlos syndrome, musculocontractural type 2, 615539
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dseENSDARG00000017988Danio rerio
 ENSGALG00000014963Gallus gallus
 DseENSMUSG00000039497Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DSEL / Q8IZU8 / dermatan sulfate epimerase-likeENSG0000017145139
Z84488.2ENSG0000028544628


Protein motifs (from Interpro)
Interpro ID Name
 IPR008929  Chondroitin AC/alginate lyase
 IPR032518  Heparinase II, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015012 heparan sulfate proteoglycan biosynthetic process IEA
 biological_processGO:0030206 chondroitin sulfate biosynthetic process IEA
 biological_processGO:0030208 dermatan sulfate biosynthetic process IDA
 cellular_componentGO:0000139 Golgi membrane TAS
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005783 endoplasmic reticulum IDA
 cellular_componentGO:0005794 Golgi apparatus IDA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0016853 isomerase activity IEA
 molecular_functionGO:0047757 chondroitin-glucuronate 5-epimerase activity IDA


Pathways (from Reactome)
Pathway description
Dermatan sulfate biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000023 Inguinal hernia 
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 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000248 Brachycephaly "Brachycephaly refers to a short, wide head, which is often caused by premature closure of both coronal sutures." [HPO:curators]
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 HP:0000411 Protruding ears 
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 HP:0000494 Downward slanting palpebral fissures 
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 HP:0000506 Telecanthus "An abnormally increased distance between the medial canthi (angle between eyelids) of the eyelids." [HPO:curators]
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 HP:0000592 Blue sclerae 
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 HP:0000678 Dental overcrowding 
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 HP:0001166 Arachnodactyly "Abnormally long and slender fingers ("spider fingers")." [HPO:curators]
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 HP:0001181 Adducted thumbs 
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 HP:0001655 Patent foramen ovale 
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 HP:0001762 Talipes equinovarus "Also called clubfoot typically has 4 main components: inversion and adduction of the forefoot; inversion of the heel and hindfoot; equinus (limitation of extension) of the ankle and subtalar joint; and internal rotation of the leg. Clubfoot is a complex, multifactorial deformity with genetic and intrauterine factors. One popular theory postulates that a clubfoot is a result of intrauterine maldevelopment of the talus that leads to adduction and plantarflexion of the foot. On radiographic projection a clubfoot can be noted as parallel axes of talus and calcaneus." [HPO:curators]
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 HP:0002007 Frontal bossing "The presence of an unusually prominent forehead." [HPO:curators]
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 HP:0002194 Delayed gross motor development 
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 HP:0003324 Generalized muscle weakness "Generalized weakness or decreased strength of the muscles." [HPO:curators]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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