ENSG00000112619


Homo sapiens

Features
Gene ID: ENSG00000112619
  
Biological name :PRPH2
  
Synonyms : P23942 / peripherin 2 / PRPH2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: -1
Band: p21.1
Gene start: 42696600
Gene end: 42722574
  
Corresponding Affymetrix probe sets: 206625_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000230381
NCBI entrez gene - 5961     See in Manteia.
OMIM - 179605
RefSeq - NM_000322
RefSeq Peptide - NP_000313
swissprot - P23942
Ensembl - ENSG00000112619
  
Related genetic diseases (OMIM): 613105 - Choroidal dystrophy, central areolar 2, 613105
  608133 - Leber congenital amaurosis 18, 608133
  169150 - Macular dystrophy, patterned, 1, 169150
  608161 - Macular dystrophy, vitelliform, 3, 608161
  136880 - Retinitis punctata albescens, 136880
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 prph2aENSDARG00000038018Danio rerio
 prph2bENSDARG00000014840Danio rerio
 PRPH2ENSGALG00000009909Gallus gallus
 Prph2ENSMUSG00000023978Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ROM1 / Q03395 / retinal outer segment membrane protein 1ENSG0000014948934


Protein motifs (from Interpro)
Interpro ID Name
 IPR000830  Peripherin/rom-1
 IPR008952  Tetraspanin, EC2 domain superfamily
 IPR018498  Peripherin/rom-1, conserved site
 IPR018499  Tetraspanin/Peripherin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007166 cell surface receptor signaling pathway IBA
 biological_processGO:0007601 visual perception TAS
 biological_processGO:0060041 retina development in camera-type eye IEA
 cellular_componentGO:0001750 photoreceptor outer segment IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane TAS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000035 Abnormality of the testis 
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 HP:0000135 Hypogonadism "Reduced function of the gonads (testes in males or ovaries in females)." [HPO:curators]
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 HP:0000405 Hearing loss, conductive 
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000431 Broad nasal bridge "Increased horizontal dimension of the upper, bony part of the nose." [HPO:curators]
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000493 Abnormality of the fovea 
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 HP:0000501 Glaucoma "Glaucoma refers loss of retinal ganglion cells in a characteristic pattern of optic neuropathy usually associated with increased intraocular pressure." [HPO:curators]
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 HP:0000505 Impaired vision 
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 HP:0000510 Retinitis pigmentosa "Hereditary degeneration and atrophy of the retina." [HPO:curators]
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 HP:0000512 Abnormal electroretinogram "Any abnormality of the electrical responses of various cell types in the retina as measured by electroretinography." [HPO:curators]
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000533 Chorioretinal atrophy 
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 HP:0000551 Abnormal color vision 
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 HP:0000563 Keratoconus "A cone-shaped deformity of the cornea." [HPO:curators]
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 HP:0000580 Pigmentary retinopathy 
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 HP:0000602 Ophthalmoplegia 
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 HP:0000603 Central scotoma 
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 HP:0000608 Macular degeneration 
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 HP:0000610 Abnormality of the choroid 
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 HP:0000613 Photophobia "Excessive sensitivity to light with the sensation of discomfort or pain in the eyes due to exposure to bright light." [HPO:curators]
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 HP:0000618 Blindness 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000648 Optic atrophy 
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 HP:0000649 Abnormality of vision evoked potentials 
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 HP:0000662 Night blindness 
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 HP:0000842 Hyperinsulinemia 
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 HP:0000987 Scarring 
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 HP:0001123 Visual field defects 
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 HP:0001133 Constricted visual fields 
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 HP:0001139 Choroideremia 
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 HP:0001249 Mental retardation 
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001513 Obesity "A status with BODY WEIGHT that is grossly above the acceptable or desirable weight, usually due to accumulation of excess FATS in the body. The standards may vary with age, sex, genetic or cultural background. In the BODY MASS INDEX, a BMI greater than 30.0 kg/m2 is considered obese, and a BMI greater than 40.0 kg/m2 is considered morbidly obese (MORBID OBESITY)." [MeSH:D009765]
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 HP:0005978 Noninsulin-dependent diabetes mellitus 
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 HP:0007401 Primary noninflammatory macular atrophy 
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 HP:0007663 Decreased central vision 
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 HP:0007675 Progressive night blindness 
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 HP:0007677 Vitelliform macular dystrophy 
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 HP:0007703 Abnormal retinal pigmentation 
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 HP:0007704 Abnormal eye movements, paroxysmal 
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 HP:0007722 Loss of retinal pigment epithelium 
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 HP:0007730 Reduced iris pigmentation 
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 HP:0007754 Macular dystrophy 
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 HP:0007814 Salt and pepper retinopathy, early 
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 HP:0007830 Night blindness beginning in the 6th decade 
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 HP:0007843 Attenuation of retinal blood vessels 
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 HP:0007899 Retinal nonattachment 
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 HP:0007913 Reticular retinal dystrophy 
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 HP:0008002 Macular pigmentary changes 
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 HP:0008046 Abnormality of the retinal vasculature 
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 HP:0008059 Aplasia/Hypoplasia of the macula 
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 HP:0008736 Hypoplasia of penis 
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 HP:0012508 Metamorphopsia "A visual anomaly in which images appear distorted. A grid of straight lines appears wavy and parts of the grid may appear blank." [HPO:probinson]
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 HP:0025148 Dark choroid "A fluorescein angiographic finding of absence of the normal background fluorescence (a dark choroid)." [PMID:27739528, PMID:7248243]
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 HP:0030329 Retinal thinning "Reduced anteroposterior thickness of the retina. This phenotype can be appreciated by retinal optical coherence tomography (OCT)." [HPO:probinson]
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 HP:0030500 Yellow/white lesions of the macula 
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 HP:0030642 Fundus albipunctatus 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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