ENSG00000114209


Homo sapiens

Features
Gene ID: ENSG00000114209
  
Biological name :PDCD10
  
Synonyms : PDCD10 / programmed cell death 10 / Q9BUL8
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: q26.1
Gene start: 167683298
Gene end: 167734939
  
Corresponding Affymetrix probe sets: 210907_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000418317
Ensembl peptide - ENSP00000420553
Ensembl peptide - ENSP00000420450
Ensembl peptide - ENSP00000420424
Ensembl peptide - ENSP00000420308
Ensembl peptide - ENSP00000420266
Ensembl peptide - ENSP00000420021
Ensembl peptide - ENSP00000420014
Ensembl peptide - ENSP00000376506
Ensembl peptide - ENSP00000417118
Ensembl peptide - ENSP00000417202
Ensembl peptide - ENSP00000417309
Ensembl peptide - ENSP00000417876
Ensembl peptide - ENSP00000418160
NCBI entrez gene - 11235     See in Manteia.
OMIM - 609118
RefSeq - XM_017005645
RefSeq - XM_017005644
RefSeq - XM_011512369
RefSeq - XM_011512368
RefSeq - XM_006713485
RefSeq - XM_005247088
RefSeq - XM_005247087
RefSeq - NM_007217
RefSeq - NM_145859
RefSeq - XM_005247086
RefSeq - NM_145860
RefSeq Peptide - NP_009148
RefSeq Peptide - NP_665858
RefSeq Peptide - NP_665859
swissprot - Q9BUL8
swissprot - C9JSA3
swissprot - H7C5M9
swissprot - F8WDF3
swissprot - C9J363
swissprot - C9J5C3
swissprot - C9J6F3
swissprot - C9J932
swissprot - C9JND6
Ensembl - ENSG00000114209
  
Related genetic diseases (OMIM): 603285 - Cerebral cavernous malformations 3, 603285
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CT027583.1ENSDARG00000111952Danio rerio
 PDCD10ENSGALG00000009477Gallus gallus
 Pdcd10ENSMUSG00000027835Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR009652  Programmed cell death protein 10


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001525 angiogenesis IEA
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0008284 positive regulation of cell proliferation IDA
 biological_processGO:0010628 positive regulation of gene expression IMP
 biological_processGO:0010629 negative regulation of gene expression IMP
 biological_processGO:0030335 positive regulation of cell migration IMP
 biological_processGO:0032874 positive regulation of stress-activated MAPK cascade IDA
 biological_processGO:0033138 positive regulation of peptidyl-serine phosphorylation IMP
 biological_processGO:0036481 intrinsic apoptotic signaling pathway in response to hydrogen peroxide IGI
 biological_processGO:0042542 response to hydrogen peroxide IDA
 biological_processGO:0043066 negative regulation of apoptotic process IDA
 biological_processGO:0043406 positive regulation of MAP kinase activity IDA
 biological_processGO:0044319 wound healing, spreading of cells IMP
 biological_processGO:0045747 positive regulation of Notch signaling pathway IMP
 biological_processGO:0050821 protein stabilization IMP
 biological_processGO:0051683 establishment of Golgi localization IMP
 biological_processGO:0071902 positive regulation of protein serine/threonine kinase activity IMP
 biological_processGO:0090051 negative regulation of cell migration involved in sprouting angiogenesis IMP
 biological_processGO:0090168 Golgi reassembly IMP
 biological_processGO:0090316 positive regulation of intracellular protein transport IMP
 biological_processGO:1903588 negative regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis IMP
 biological_processGO:1990830 cellular response to leukemia inhibitory factor IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0019901 protein kinase binding IPI
 molecular_functionGO:0042803 protein homodimerization activity IPI
 molecular_functionGO:0047485 protein N-terminus binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
Show

 HP:0001342 Cerebral hemorrhage "A cerebral hemorrhage (or intracerebral hemorrhage, ICH), is a type of intracranial hemorrhage that occurs within the brain tissue itself." [HPO:curators]
Show

 HP:0002060 Abnormality of the cerebrum 
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 HP:0002315 Headache "Cephalgia, or pain in the head originating from the cerebral vault." [HPO:curators]
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 HP:0002516 Increased intracranial pressure 
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 HP:0002572 Episodic vomiting "Paroxysmal, recurrent episodes of vomiting." [HPO:curators]
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002858 Meningioma 
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 HP:0003470 Paralysis "Paralysis of voluntary muscles means loss of contraction due to interruption of one or more motor pathways from the brain to the muscle fibers. Although the word paralysis is often used interchangeably to mean either complete or partial loss of muscle strength, it is preferable to use paralysis or plegia for complete or severe loss of muscle strength, and paresis for partial or slight loss. Motor paralysis results from deficits of the upper motor neurons (corticospinal, corticobulbar, or subcorticospinal). Motor paralysis is often accompanied by an impairment in the facility of movement." [HPO:curators]
Show

 HP:0007872 Choroidal hemangiomata 
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 HP:0011276 Vascular skin abnormality 
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 HP:0011513 Retinal cavernous angioma "A benign tumor of the retina that appears as a grouping of blood-filled saccules within the inner retinal layers or on the surface of the optic disc. Retinal cavernous angioma are described as having a cluster of grapes appearance." [HPO:probinson, pmid:20844673]
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 HP:0012721 Venous malformation "A vascular malformation resulting from a developmental error of venous tissue composed of dysmorphic channels lined by flattened endothelium and exhibiting slow turnover. A venous malformation may present as a blue patch on the skin ranging to a soft blue mass. Venous malformations are easily compressible and usually swell in thewhen venous pressure increases (e.g., when held in a dependent position or when a child cries). They may be relatively localized or quite extensive within an anatomic region." [HPO:probinson]
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 HP:0012748 Focal T2 hyperintense brainstem lesion "A lighter than expected T2 signal on magnetic resonance imaging (MIR) of the brainstem. This term refers to a localized hyperintensity affecting a particular region of the brainstem." [UToronto:htrang]
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 HP:0012749 Focal T2 hypointense brainstem lesion "A darker than expected T2 signal on magnetic resonance imaging (MIR) of the brainstem. This term refers to a localized hypointensity affecting a particular region of the brainstem." [UToronto:htrang]
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 HP:0030430 Neuroma "A tumor made up of nerve cells and nerve fibers." [HPO:probinson]
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 HP:0100543 Cognitive impairment "Abnormality in the process of thought including the ability to process information." [HPO:sdoelken]
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 HP:0100561 Spinal cord lesions 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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