ENSG00000115840


Homo sapiens

Features
Gene ID: ENSG00000115840
  
Biological name :SLC25A12
  
Synonyms : O75746 / SLC25A12 / solute carrier family 25 member 12
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: -1
Band: q31.1
Gene start: 171784370
Gene end: 171999859
  
Corresponding Affymetrix probe sets: 203339_at (Human Genome U133 Plus 2.0 Array)   203340_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000413968
Ensembl peptide - ENSP00000437845
Ensembl peptide - ENSP00000263812
Ensembl peptide - ENSP00000388658
NCBI entrez gene - 8604     See in Manteia.
OMIM - 603667
RefSeq - NM_003705
RefSeq - XM_011512070
RefSeq Peptide - NP_003696
swissprot - H0YFB2
swissprot - B4DGK6
swissprot - O75746
swissprot - F8W9J0
Ensembl - ENSG00000115840
  
Related genetic diseases (OMIM): 612949 - Epileptic encephalopathy, early infantile, 39, 612949
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC25A12ENSGALG00000009545Gallus gallus
 Q8BH59ENSMUSG00000027010Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9UJS0 / SLC25A13 / solute carrier family 25 member 13ENSG0000000486477
Q9H936 / SLC25A22 / solute carrier family 25 member 22ENSG0000017754220
Q9H1K4 / SLC25A18 / solute carrier family 25 member 18ENSG0000018290220
Q96H78 / SLC25A44 / solute carrier family 25 member 44ENSG0000016078513


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR002067  Mitochondrial carrier protein
 IPR011992  EF-hand domain pair
 IPR018108  Mitochondrial substrate/solute carrier
 IPR018247  EF-Hand 1, calcium-binding site
 IPR023395  Mitochondrial carrier domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006094 gluconeogenesis TAS
 biological_processGO:0015810 aspartate transmembrane transport IDA
 biological_processGO:0015813 L-glutamate transmembrane transport IDA
 biological_processGO:0043490 malate-aspartate shuttle IDA
 biological_processGO:0051592 response to calcium ion IDA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0070778 L-aspartate transmembrane transport IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005743 mitochondrial inner membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0043209 myelin sheath IEA
 molecular_functionGO:0005313 L-glutamate transmembrane transporter activity IDA
 molecular_functionGO:0005509 calcium ion binding IDA
 molecular_functionGO:0015172 acidic amino acid transmembrane transporter activity TAS
 molecular_functionGO:0015183 L-aspartate transmembrane transporter activity IDA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Mitochondrial protein import
Gluconeogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000817 Poor eye contact 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001344 Absent speech development 
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0003593 Early onset 
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 HP:0006808 Hypomyelination of the brain 
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 HP:0006829 Severe muscular hypotonia "A severe degree of muscular hypotonia characterized by markedly reduced muscle tone." [HPO:curators]
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 HP:0200134 Epileptic encephalopathy 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr