ENSG00000117090


Homo sapiens

Features
Gene ID: ENSG00000117090
  
Biological name :SLAMF1
  
Synonyms : Q13291 / signaling lymphocytic activation molecule family member 1 / SLAMF1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: q23.3
Gene start: 160608100
Gene end: 160647295
  
Corresponding Affymetrix probe sets: 1555626_a_at (Human Genome U133 Plus 2.0 Array)   206181_at (Human Genome U133 Plus 2.0 Array)   239427_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000235739
Ensembl peptide - ENSP00000306190
Ensembl peptide - ENSP00000438406
NCBI entrez gene - 6504     See in Manteia.
OMIM - 603492
RefSeq - XM_017002131
RefSeq - NM_003037
RefSeq - XM_005245456
RefSeq - XM_011509905
RefSeq - XM_017002129
RefSeq - XM_017002130
RefSeq Peptide - NP_003028
RefSeq Peptide - NP_001317683
swissprot - Q13291
swissprot - Q96QJ2
Ensembl - ENSG00000117090
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000046393Gallus gallus
 Q9QUM4ENSMUSG00000015316Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007110  Immunoglobulin-like domain
 IPR010407  Signaling lymphocytic activation molecule, N-terminal
 IPR013783  Immunoglobulin-like fold
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002250 adaptive immune response IEA
 biological_processGO:0002277 myeloid dendritic cell activation involved in immune response IDA
 biological_processGO:0002376 immune system process IEA
 biological_processGO:0006909 phagocytosis IEA
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0008284 positive regulation of cell proliferation TAS
 biological_processGO:0016032 viral process IEA
 biological_processGO:0032695 negative regulation of interleukin-12 production IDA
 biological_processGO:0032715 negative regulation of interleukin-6 production IDA
 biological_processGO:0032720 negative regulation of tumor necrosis factor production IDA
 biological_processGO:0045087 innate immune response IEA
 biological_processGO:0046330 positive regulation of JNK cascade IDA
 biological_processGO:0046649 lymphocyte activation IEA
 biological_processGO:0046718 viral entry into host cell IEA
 biological_processGO:0070374 positive regulation of ERK1 and ERK2 cascade IDA
 biological_processGO:2000349 negative regulation of CD40 signaling pathway IDA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0009986 cell surface IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0001618 virus receptor activity IEA
 molecular_functionGO:0003823 antigen binding TAS
 molecular_functionGO:0004888 transmembrane signaling receptor activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042802 identical protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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