ENSG00000117133


Homo sapiens

Features
Gene ID: ENSG00000117133
  
Biological name :RPF1
  
Synonyms : Q9H9Y2 / ribosome production factor 1 homolog / RPF1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: p22.3
Gene start: 84479259
Gene end: 84497790
  
Corresponding Affymetrix probe sets: 218462_at (Human Genome U133 Plus 2.0 Array)   234243_at (Human Genome U133 Plus 2.0 Array)   234244_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000359688
Ensembl peptide - ENSP00000359690
NCBI entrez gene - 80135     See in Manteia.
RefSeq - NM_025065
RefSeq Peptide - NP_079341
swissprot - Q9H9Y2
swissprot - X6R7Q1
Ensembl - ENSG00000117133
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpf1ENSDARG00000005738Danio rerio
 ENSGALG00000008796Gallus gallus
 Rpf1ENSMUSG00000028187Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007109  Brix domain
 IPR036621  Anticodon-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000027 ribosomal large subunit assembly IBA
 biological_processGO:0000460 maturation of 5.8S rRNA IBA
 biological_processGO:0000470 maturation of LSU-rRNA IBA
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0042254 ribosome biogenesis IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0030687 preribosome, large subunit precursor IBA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0019843 rRNA binding IEA
 molecular_functionGO:0042134 rRNA primary transcript binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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