ENSGALG00000008796


Gallus gallus

Features
Gene ID: ENSGALG00000008796
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : Q7TND5 / Q9H9Y2 / ribosome production factor 1 homolog / RPF1
  
Species: Gallus gallus
  
Chr. number: 8
Strand: -1
Band:
Gene start: 16640613
Gene end: 16646263
  
Corresponding Affymetrix probe sets: Gga.3567.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000014284
Ensembl peptide - ENSGALP00000063056
Ensembl peptide - ENSGALP00000059616
NCBI entrez gene - 424539     See in Manteia.
RefSeq - XM_422376
swissprot - A0A1L1RW43
swissprot - A0A1L1RLH8
swissprot - F1NRK2
Ensembl - ENSGALG00000008796
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpf1ENSDARG00000005738Danio rerio
 RPF1ENSG00000117133Homo sapiens
 Rpf1ENSMUSG00000028187Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004154  Anticodon-binding
 IPR007109  Brix domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000027 ribosomal large subunit assembly IBA
 biological_processGO:0000460 maturation of 5.8S rRNA IBA
 biological_processGO:0000470 maturation of LSU-rRNA IBA
 cellular_componentGO:0005730 nucleolus IBA
 cellular_componentGO:0030687 preribosome, large subunit precursor IBA
 molecular_functionGO:0042134 rRNA primary transcript binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr