ENSG00000119906


Homo sapiens

Features
Gene ID: ENSG00000119906
  
Biological name :SLF2
  
Synonyms : Q8IX21 / SLF2 / SMC5-SMC6 complex localization factor 2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 10
Strand: 1
Band: q24.31
Gene start: 100912569
Gene end: 100965136
  
Corresponding Affymetrix probe sets: 1553909_x_at (Human Genome U133 Plus 2.0 Array)   203481_at (Human Genome U133 Plus 2.0 Array)   203482_at (Human Genome U133 Plus 2.0 Array)   235590_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000476379
Ensembl peptide - ENSP00000238961
Ensembl peptide - ENSP00000359292
Ensembl peptide - ENSP00000359294
NCBI entrez gene - 55719     See in Manteia.
OMIM - 610348
RefSeq - XM_011539944
RefSeq - NM_001136123
RefSeq - NM_001243770
RefSeq - NM_018121
RefSeq - XM_005269965
RefSeq Peptide - NP_001230699
RefSeq Peptide - NP_060591
RefSeq Peptide - NP_001129595
swissprot - Q8IX21
swissprot - B1AL16
Ensembl - ENSG00000119906
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slf2ENSDARG00000003328Danio rerio
 SLF2ENSGALG00000008025Gallus gallus
 Slf2ENSMUSG00000036097Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8IXR5 / FAM178B / family with sequence similarity 178 member BENSG0000016875415


Protein motifs (from Interpro)
Interpro ID Name
 IPR026161  FAM178 family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0031334 positive regulation of protein complex assembly IMP
 biological_processGO:0034184 positive regulation of maintenance of mitotic sister chromatid cohesion IMP
 biological_processGO:1990166 protein localization to site of double-strand break IDA
 biological_processGO:2000781 positive regulation of double-strand break repair IDA
 cellular_componentGO:0000785 chromatin IDA
 cellular_componentGO:0005615 extracellular space HDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0035861 site of double-strand break IDA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0031625 ubiquitin protein ligase binding IPI
 molecular_functionGO:0044877 protein-containing complex binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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