ENSMUSG00000036097


Mus musculus

Features
Gene ID: ENSMUSG00000036097
  
Biological name :Slf2
  
Synonyms : Slf2 / SMC5-SMC6 complex localization factor 2
  
Possible biological names infered from orthology : Q8IX21
  
Species: Mus musculus
  
Chr. number: 19
Strand: 1
Band: C3
Gene start: 44931119
Gene end: 44983787
  
Corresponding Affymetrix probe sets: 10463404 (MoGene1.0st)   10463410 (MoGene1.0st)   1438233_at (Mouse Genome 430 2.0 Array)   1445856_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000093758
NCBI entrez gene - 226151     See in Manteia.
MGI - MGI:1924968
RefSeq - XM_017318164
RefSeq - NM_001081225
RefSeq - XM_006527000
RefSeq - XM_017318163
RefSeq Peptide - NP_001074694
swissprot - E9Q839
Ensembl - ENSMUSG00000036097
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slf2ENSDARG00000003328Danio rerio
 SLF2ENSGALG00000008025Gallus gallus
 SLF2ENSG00000119906Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Fam178b / family with sequence similarity 178 member B / Q8IXR5*ENSMUSG0000004633713


Protein motifs (from Interpro)
Interpro ID Name
 IPR026161  FAM178 family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0031334 positive regulation of protein complex assembly IEA
 biological_processGO:0034184 positive regulation of maintenance of mitotic sister chromatid cohesion IEA
 biological_processGO:1990166 protein localization to site of double-strand break IEA
 biological_processGO:2000781 positive regulation of double-strand break repair IEA
 cellular_componentGO:0000785 chromatin IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0035861 site of double-strand break IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IEA
 molecular_functionGO:0044877 protein-containing complex binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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