ENSG00000121413


Homo sapiens

Features
Gene ID: ENSG00000121413
  
Biological name :ZSCAN18
  
Synonyms : Q8TBC5 / zinc finger and SCAN domain containing 18 / ZSCAN18
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: -1
Band: q13.43
Gene start: 58083838
Gene end: 58118427
  
Corresponding Affymetrix probe sets: 217593_at (Human Genome U133 Plus 2.0 Array)   218312_s_at (Human Genome U133 Plus 2.0 Array)   232866_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000472129
Ensembl peptide - ENSP00000473019
Ensembl peptide - ENSP00000473134
Ensembl peptide - ENSP00000240727
Ensembl peptide - ENSP00000392653
Ensembl peptide - ENSP00000412253
Ensembl peptide - ENSP00000468934
Ensembl peptide - ENSP00000469201
Ensembl peptide - ENSP00000470123
Ensembl peptide - ENSP00000470329
Ensembl peptide - ENSP00000471570
NCBI entrez gene - 65982     See in Manteia.
RefSeq - XM_017027171
RefSeq - NM_001145542
RefSeq - NM_001145543
RefSeq - NM_001145544
RefSeq - NM_023926
RefSeq - XM_005259174
RefSeq - XM_006723335
RefSeq - XM_011527237
RefSeq - XM_011527238
RefSeq - XM_011527239
RefSeq - XM_017027169
RefSeq - XM_017027170
RefSeq Peptide - NP_001139016
RefSeq Peptide - NP_076415
RefSeq Peptide - NP_001139015
RefSeq Peptide - NP_001139014
swissprot - M0R111
swissprot - M0R1U9
swissprot - M0R364
swissprot - M0R3C6
swissprot - Q8TBC5
swissprot - A0A024R4T0
swissprot - A0A0C4DG78
swissprot - M0QXJ0
swissprot - M0QZ65
Ensembl - ENSG00000121413
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Zscan18ENSMUSG00000070822Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
O14978 / ZNF263 / zinc finger protein 263ENSG0000000619422
Q9NWS9 / ZNF446 / zinc finger protein 446ENSG0000008383821
Q6NSZ9 / ZSCAN25 / zinc finger and SCAN domain containing 25ENSG0000019703720
O95125 / ZNF202 / zinc finger protein 202ENSG0000016626120
O14771 / ZNF213 / zinc finger protein 213ENSG0000008564419
O60304 / ZNF500 / zinc finger protein 500ENSG0000010319919
Q8NBB4 / ZSCAN1 / zinc finger and SCAN domain containing 1ENSG0000015246719
ZNF18 / P17022 / zinc finger protein 18ENSG0000015495718
Q96IT1 / ZNF496 / zinc finger protein 496ENSG0000016271418
Q15697 / ZNF174 / zinc finger protein 174ENSG0000010334315
Q96N77 / ZNF641 / zinc finger protein 641ENSG0000016752811
P57086 / SCAND1 / SCAN domain containing 1ENSG000001712228
AC025283.3ENSG000002853292


Protein motifs (from Interpro)
Interpro ID Name
 IPR003309  SCAN domain
 IPR008916  Retrovirus capsid, C-terminal
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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