ENSG00000154957


Homo sapiens

Features
Gene ID: ENSG00000154957
  
Biological name :ZNF18
  
Synonyms : P17022 / zinc finger protein 18 / ZNF18
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: p12
Gene start: 11977439
Gene end: 11997510
  
Corresponding Affymetrix probe sets: 226787_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000463471
Ensembl peptide - ENSP00000462416
Ensembl peptide - ENSP00000462877
Ensembl peptide - ENSP00000315664
Ensembl peptide - ENSP00000391376
Ensembl peptide - ENSP00000462296
Ensembl peptide - ENSP00000462383
NCBI entrez gene - 7566     See in Manteia.
OMIM - 194524
RefSeq - XM_017025011
RefSeq - NM_144680
RefSeq - XM_011524002
RefSeq - XM_017025006
RefSeq - XM_017025007
RefSeq - XM_017025008
RefSeq - XM_017025009
RefSeq - XM_017025010
RefSeq - NM_001303281
RefSeq - NM_001303282
RefSeq Peptide - NP_653281
RefSeq Peptide - NP_001290210
RefSeq Peptide - NP_001290211
swissprot - J3KSA1
swissprot - P17022
swissprot - J3KTA0
swissprot - J3KSC1
Ensembl - ENSG00000154957
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q810A1ENSMUSG00000018347Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
O14978 / ZNF263 / zinc finger protein 263ENSG0000000619434
O95125 / ZNF202 / zinc finger protein 202ENSG0000016626132
O60304 / ZNF500 / zinc finger protein 500ENSG0000010319930
O14771 / ZNF213 / zinc finger protein 213ENSG0000008564429
Q6NSZ9 / ZSCAN25 / zinc finger and SCAN domain containing 25ENSG0000019703729
Q96IT1 / ZNF496 / zinc finger protein 496ENSG0000016271427
Q15697 / ZNF174 / zinc finger protein 174ENSG0000010334326
Q9NWS9 / ZNF446 / zinc finger protein 446ENSG0000008383825
Q96N77 / ZNF641 / zinc finger protein 641ENSG0000016752820
Q8NBB4 / ZSCAN1 / zinc finger and SCAN domain containing 1ENSG0000015246720
Q8TBC5 / ZSCAN18 / zinc finger and SCAN domain containing 18ENSG0000012141319
P57086 / SCAND1 / SCAN domain containing 1ENSG000001712228
AC025283.3ENSG000002853293


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR003309  SCAN domain
 IPR008916  Retrovirus capsid, C-terminal
 IPR013087  Zinc finger C2H2-type
 IPR027764  Zinc finger protein 18/446
 IPR036051  KRAB domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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