ENSG00000121766


Homo sapiens

Features
Gene ID: ENSG00000121766
  
Biological name :ZCCHC17
  
Synonyms : Q9NP64 / ZCCHC17 / zinc finger CCHC-type containing 17
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: p35.2
Gene start: 31296982
Gene end: 31364953
  
Corresponding Affymetrix probe sets: 223107_s_at (Human Genome U133 Plus 2.0 Array)   223108_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000444742
Ensembl peptide - ENSP00000480986
Ensembl peptide - ENSP00000486079
Ensembl peptide - ENSP00000482122
Ensembl peptide - ENSP00000481743
Ensembl peptide - ENSP00000481299
Ensembl peptide - ENSP00000343557
Ensembl peptide - ENSP00000362819
NCBI entrez gene - 51538     See in Manteia.
RefSeq - XM_011541567
RefSeq - NM_001282566
RefSeq - NM_001282567
RefSeq - NM_001282568
RefSeq - NM_001282569
RefSeq - NM_001282570
RefSeq - NM_001282571
RefSeq - NM_001282572
RefSeq - NM_001282573
RefSeq - NM_001282574
RefSeq - NM_016505
RefSeq - XM_006710681
RefSeq Peptide - NP_057589
RefSeq Peptide - NP_001269498
RefSeq Peptide - NP_001269499
RefSeq Peptide - NP_001269500
RefSeq Peptide - NP_001269501
RefSeq Peptide - NP_001269502
RefSeq Peptide - NP_001269503
RefSeq Peptide - NP_001269495
RefSeq Peptide - NP_001269496
RefSeq Peptide - NP_001269497
swissprot - Q9NP64
swissprot - A0A087WXF8
swissprot - A0A087WYF0
swissprot - A0A087WXU5
swissprot - A0A0D9SEW3
swissprot - A0A087WYV3
Ensembl - ENSG00000121766
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zcchc17ENSDARG00000018936Danio rerio
 ZCCHC17ENSGALG00000000618Gallus gallus
 Q9ESX4ENSMUSG00000028772Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001878  Zinc finger, CCHC-type
 IPR003029  S1 domain
 IPR012340  Nucleic acid-binding, OB-fold
 IPR022967  RNA-binding domain, S1
 IPR036875  Zinc finger, CCHC-type superfamily
 IPR037320  Nucleolar protein of 40kDa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr