ENSG00000121957


Homo sapiens

Features
Gene ID: ENSG00000121957
  
Biological name :GPSM2
  
Synonyms : G protein signaling modulator 2 / GPSM2 / P81274
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: p13.3
Gene start: 108875350
Gene end: 108934545
  
Corresponding Affymetrix probe sets: 205240_at (Human Genome U133 Plus 2.0 Array)   221922_at (Human Genome U133 Plus 2.0 Array)   230002_at (Human Genome U133 Plus 2.0 Array)   233058_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000494056
Ensembl peptide - ENSP00000496756
Ensembl peptide - ENSP00000496104
Ensembl peptide - ENSP00000495317
Ensembl peptide - ENSP00000495168
Ensembl peptide - ENSP00000264126
Ensembl peptide - ENSP00000385510
Ensembl peptide - ENSP00000390629
Ensembl peptide - ENSP00000392138
Ensembl peptide - ENSP00000401948
Ensembl peptide - ENSP00000408664
NCBI entrez gene - 29899     See in Manteia.
OMIM - 609245
RefSeq - XM_011541301
RefSeq - XM_006710589
RefSeq - XM_011541303
RefSeq - NM_001321038
RefSeq - NM_001321039
RefSeq - NM_013296
RefSeq - XM_017001098
RefSeq - XM_017001097
RefSeq - XM_011541302
RefSeq Peptide - NP_001307968
RefSeq Peptide - NP_001307967
RefSeq Peptide - NP_037428
swissprot - Q5T1N9
swissprot - P81274
swissprot - B0QZD0
swissprot - H0Y4A4
swissprot - A0A024R0F8
swissprot - B0QZC9
Ensembl - ENSG00000121957
  
Related genetic diseases (OMIM): 604213 - Chudley-McCullough syndrome, 604213
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gpsm2ENSDARG00000017311Danio rerio
 gpsm2lENSDARG00000102026Danio rerio
 GPSM2ENSGALG00000002090Gallus gallus
 Gpsm2ENSMUSG00000027883Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GPSM1 / Q86YR5 / G protein signaling modulator 1ENSG0000016036056
TTC28 / Q96AY4 / tetratricopeptide repeat domain 28ENSG0000010015429
PCP2 / Q8IVA1 / Purkinje cell protein 2ENSG000001747886


Protein motifs (from Interpro)
Interpro ID Name
 IPR003109  GoLoco motif
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019734  Tetratricopeptide repeat
 IPR023392  Mitochondrial outer membrane translocase complex, Tom20 domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000132 establishment of mitotic spindle orientation IMP
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0007052 mitotic spindle organization IMP
 biological_processGO:0007186 G-protein coupled receptor signaling pathway TAS
 biological_processGO:0031291 Ran protein signal transduction IMP
 biological_processGO:0050790 regulation of catalytic activity IEA
 biological_processGO:0051301 cell division IEA
 biological_processGO:0051661 maintenance of centrosome location IMP
 biological_processGO:0060236 regulation of mitotic spindle organization IMP
 biological_processGO:1904778 positive regulation of protein localization to cell cortex IMP
 biological_processGO:1905832 positive regulation of spindle assembly IMP
 cellular_componentGO:0000922 spindle pole IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005813 centrosome IDA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005938 cell cortex IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016328 lateral plasma membrane IEA
 cellular_componentGO:0032991 protein-containing complex IMP
 cellular_componentGO:0097431 mitotic spindle pole IDA
 cellular_componentGO:0097575 lateral cell cortex IDA
 cellular_componentGO:0099738 cell cortex region IDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0001965 G-protein alpha-subunit binding IEA
 molecular_functionGO:0005092 GDP-dissociation inhibitor activity ISS
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008022 protein C-terminus binding IPI
 molecular_functionGO:0019904 protein domain specific binding IPI
 molecular_functionGO:0030695 GTPase regulator activity IEA
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:0043621 protein self-association IMP
 molecular_functionGO:0070840 dynein complex binding IDA


Pathways (from Reactome)
Pathway description
G alpha (i) signalling events


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000238 Hydrocephalus 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001256 Mental retardation, mild "Mild mental retardation is defined as an intelligence quotient (IQ) in the range of 50-69." [HPO:curators]
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 HP:0001321 Cerebellar hypoplasia 
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 HP:0001338 Partial agenesis of the corpus callosum "A partial failure of the development of the corpus callosum." [HPO:curators]
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 HP:0002079 Hypoplasia of the corpus callosum "Underdevelopment of the corpus callosum." [HPO:curators]
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 HP:0002119 Ventriculomegaly 
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 HP:0002126 Polymicrogyria "A congenital abnormality of the cerebral hemisphere characterized by an excessive number of small gyri (convolutions) on the surface of the brain." [HPO:curators]
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 HP:0002281 Gray matter heterotopias "Gray matter heterotopia is a neurological disorder caused by clumps of grey matter being located in the wrong part of the brain. It is characterized as a type of cortical dysplasia. The neurons in heterotopia appear to be normal, except for their mislocation; nuclear studies have shown glucose metabolism equal to that of normally positioned gray matter. The condition causes a variety of symptoms, but usually includes some degree of epilepsy or recurring seizures, and often affects the brain s ability to function on higher levels. Symptoms range from nonexistent to profound, in which case heterotopia can result in severe seizure disorder, loss of motor skills, and mental retardation." [HPO:curators]
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 HP:0002700 Large foramen magnum "An abnormal increase in the size of the foramen magnum." [HPO:curators]
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 HP:0006989 Dysplastic corpus callosum 
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 HP:0007033 Cerebellar dysplasia 
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 HP:0008625 Severe sensorineural hearing loss 
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 HP:0100702 Arachnoid cyst "Arachnoid cysts are filled with cerebrospinal fluid encased by arachnoidal cells." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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