ENSG00000124104


Homo sapiens

Features
Gene ID: ENSG00000124104
  
Biological name :SNX21
  
Synonyms : Q969T3 / SNX21 / sorting nexin family member 21
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: 1
Band: q13.12
Gene start: 45833810
Gene end: 45843275
  
Corresponding Affymetrix probe sets: 1553960_at (Human Genome U133 Plus 2.0 Array)   1553961_s_at (Human Genome U133 Plus 2.0 Array)   226595_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000361619
Ensembl peptide - ENSP00000420169
Ensembl peptide - ENSP00000344586
Ensembl peptide - ENSP00000478395
Ensembl peptide - ENSP00000361620
Ensembl peptide - ENSP00000418593
NCBI entrez gene - 90203     See in Manteia.
RefSeq - XM_011529099
RefSeq - NM_001042632
RefSeq - NM_001042633
RefSeq - NM_033421
RefSeq - NM_152897
RefSeq - XM_011529096
RefSeq Peptide - NP_001036098
RefSeq Peptide - NP_219489
RefSeq Peptide - NP_690857
RefSeq Peptide - NP_001036097
swissprot - Q5JZH3
swissprot - Q5JZH4
swissprot - Q969T3
swissprot - A0A0S2Z632
swissprot - Q05DJ0
Ensembl - ENSG00000124104
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snx21ENSDARG00000062770Danio rerio
 SNX21ENSGALG00000006836Gallus gallus
 Snx21ENSMUSG00000050373Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SNX20 / Q7Z614 / sorting nexin 20ENSG0000016720829


Protein motifs (from Interpro)
Interpro ID Name
 IPR001683  Phox homologous domain
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR036871  PX domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030659 cytoplasmic vesicle membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0031901 early endosome membrane ISS
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0005546 phosphatidylinositol-4,5-bisphosphate binding ISS
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0032266 phosphatidylinositol-3-phosphate binding ISS
 molecular_functionGO:0035091 phosphatidylinositol binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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