ENSG00000167208


Homo sapiens

Features
Gene ID: ENSG00000167208
  
Biological name :SNX20
  
Synonyms : Q7Z614 / SNX20 / sorting nexin 20
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: -1
Band: q12.1
Gene start: 50666300
Gene end: 50681353
  
Corresponding Affymetrix probe sets: 1563641_a_at (Human Genome U133 Plus 2.0 Array)   228869_at (Human Genome U133 Plus 2.0 Array)   229045_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000388875
Ensembl peptide - ENSP00000484863
Ensembl peptide - ENSP00000454863
Ensembl peptide - ENSP00000300590
Ensembl peptide - ENSP00000332062
NCBI entrez gene - 124460     See in Manteia.
OMIM - 613281
RefSeq - NM_001144972
RefSeq - NM_153337
RefSeq - NM_182854
RefSeq Peptide - NP_699168
RefSeq Peptide - NP_001138444
RefSeq Peptide - NP_878274
swissprot - Q7Z614
swissprot - A0A087X2C1
Ensembl - ENSG00000167208
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snx20ENSDARG00000045554Danio rerio
 SNX20ENSGALG00000038374Gallus gallus
 Snx20ENSMUSG00000031662Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SNX21 / Q969T3 / sorting nexin family member 21ENSG0000012410434


Protein motifs (from Interpro)
Interpro ID Name
 IPR001683  Phox homologous domain
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR036871  PX domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031901 early endosome membrane ISS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005546 phosphatidylinositol-4,5-bisphosphate binding ISS
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0032266 phosphatidylinositol-3-phosphate binding ISS
 molecular_functionGO:0035091 phosphatidylinositol binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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