ENSG00000124155


Homo sapiens

Features
Gene ID: ENSG00000124155
  
Biological name :PIGT
  
Synonyms : phosphatidylinositol glycan anchor biosynthesis class T / PIGT / Q969N2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: 1
Band: q13.12
Gene start: 45416067
Gene end: 45456934
  
Corresponding Affymetrix probe sets: 1568986_x_at (Human Genome U133 Plus 2.0 Array)   217770_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000492335
Ensembl peptide - ENSP00000279035
Ensembl peptide - ENSP00000279036
Ensembl peptide - ENSP00000361774
Ensembl peptide - ENSP00000407574
Ensembl peptide - ENSP00000408354
Ensembl peptide - ENSP00000441577
Ensembl peptide - ENSP00000443963
Ensembl peptide - ENSP00000491058
Ensembl peptide - ENSP00000491072
Ensembl peptide - ENSP00000491074
Ensembl peptide - ENSP00000491118
Ensembl peptide - ENSP00000491164
Ensembl peptide - ENSP00000491170
Ensembl peptide - ENSP00000491171
Ensembl peptide - ENSP00000491194
Ensembl peptide - ENSP00000491233
Ensembl peptide - ENSP00000491297
Ensembl peptide - ENSP00000491308
Ensembl peptide - ENSP00000491406
Ensembl peptide - ENSP00000491458
Ensembl peptide - ENSP00000491534
Ensembl peptide - ENSP00000491538
Ensembl peptide - ENSP00000491553
Ensembl peptide - ENSP00000491566
Ensembl peptide - ENSP00000491588
Ensembl peptide - ENSP00000491600
Ensembl peptide - ENSP00000491678
Ensembl peptide - ENSP00000491697
Ensembl peptide - ENSP00000491744
Ensembl peptide - ENSP00000491772
Ensembl peptide - ENSP00000491856
Ensembl peptide - ENSP00000491886
Ensembl peptide - ENSP00000491913
Ensembl peptide - ENSP00000492007
Ensembl peptide - ENSP00000492043
Ensembl peptide - ENSP00000492094
Ensembl peptide - ENSP00000492174
Ensembl peptide - ENSP00000492210
Ensembl peptide - ENSP00000492270
Ensembl peptide - ENSP00000492279
Ensembl peptide - ENSP00000492295
Ensembl peptide - ENSP00000492370
Ensembl peptide - ENSP00000492417
Ensembl peptide - ENSP00000492418
Ensembl peptide - ENSP00000492464
Ensembl peptide - ENSP00000492498
Ensembl peptide - ENSP00000492507
Ensembl peptide - ENSP00000492727
Ensembl peptide - ENSP00000492743
Ensembl peptide - ENSP00000492843
Ensembl peptide - ENSP00000492848
Ensembl peptide - ENSP00000492873
Ensembl peptide - ENSP00000492875
Ensembl peptide - ENSP00000492883
NCBI entrez gene - 51604     See in Manteia.
OMIM - 610272
RefSeq - NM_001184729
RefSeq - NM_001184730
RefSeq - NM_015937
RefSeq - XM_005260432
RefSeq - NM_001184728
RefSeq - XM_005260430
RefSeq Peptide - NP_057021
RefSeq Peptide - NP_001171658
RefSeq Peptide - NP_001171657
RefSeq Peptide - NP_001171659
swissprot - A0A1W2PPI8
swissprot - A0A1W2PPK4
swissprot - A0A1W2PPQ7
swissprot - A0A1W2PPR6
swissprot - A0A1W2PPS0
swissprot - A0A1W2PPU8
swissprot - A0A1W2PQ29
swissprot - A0A1W2PQ50
swissprot - A0A1W2PQ52
swissprot - A0A1W2PQA4
swissprot - A0A1W2PQI9
swissprot - A0A1W2PQL3
swissprot - A0A1W2PQL9
swissprot - A0A1W2PQN1
swissprot - A0A1W2PQY1
swissprot - A0A1W2PR22
swissprot - A0A1W2PR34
swissprot - A0A1W2PR70
swissprot - A0A1W2PR73
swissprot - A0A1W2PR92
swissprot - A0A1W2PRG1
swissprot - A0A1W2PRH2
swissprot - A0A1W2PRH8
swissprot - A0A1W2PRL6
swissprot - A0A1W2PRV7
swissprot - A0A1W2PRZ8
swissprot - A0A1W2PSC5
swissprot - B7Z7C5
swissprot - F6W983
swissprot - H7C2Y2
swissprot - Q969N2
swissprot - A0A1W2PRB4
swissprot - A0A1W2PNP0
swissprot - A0A1W2PNS2
swissprot - A0A1W2PNW9
swissprot - A0A1W2PNZ5
swissprot - A0A1W2PP03
swissprot - A0A1W2PP13
swissprot - A0A1W2PP53
swissprot - A0A1W2PP57
swissprot - A0A1W2PP91
swissprot - A0A1W2PP98
swissprot - A0A1W2PPC3
Ensembl - ENSG00000124155
  
Related genetic diseases (OMIM): 615398 - Multiple congenital anomalies-hypotonia-seizures syndrome 3, 615398
  615399 - ?Paroxysmal nocturnal hemoglobinuria 2, 615399
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pigtENSDARG00000075842Danio rerio
 PIGTENSGALG00000003909Gallus gallus
 PigtENSMUSG00000017721Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007245  GPI transamidase component PIG-T


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006506 GPI anchor biosynthetic process IEA
 biological_processGO:0016255 attachment of GPI anchor to protein IEA
 biological_processGO:0030182 neuron differentiation IEA
 biological_processGO:0051402 neuron apoptotic process IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane NAS
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0042765 GPI-anchor transamidase complex IEA
 molecular_functionGO:0003923 GPI-anchor transamidase activity TAS
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Attachment of GPI anchor to uPAR


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
Show

 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000071 Ureteral stenosis 
Show

 HP:0000107 Renal cysts 
Show

 HP:0000121 Nephrocalcinosis 
Show

 HP:0000164 Abnormality of the teeth "Any abnormality of the primary (deciduous) or permanent teeth." [HPO:curators]
Show

 HP:0000194 Open mouth 
Show

 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
Show

 HP:0000248 Brachycephaly "Brachycephaly refers to a short, wide head, which is often caused by premature closure of both coronal sutures." [HPO:curators]
Show

 HP:0000256 Macrocephaly "The presence of an abnormally large `skull` (FMA:46565)." [HPO:probinson]
Show

 HP:0000341 Narrow forehead "An abnormally reduced side-to-side width of the forehead." [HPO:curators]
Show

 HP:0000343 Long philtrum 
Show

 HP:0000348 High forehead "An abnormally increased height of the forehead." [HPO:curators]
Show

 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
Show

 HP:0000505 Impaired vision 
Show

 HP:0000540 Hypermetropia 
Show

 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
Show

 HP:0000767 Pectus excavatum "A defect of the chest wall characterized by a depression of the sternum, giving the chest ("pectus") a caved-in ("excavatum") appearance." [HPO:curators]
Show

 HP:0000938 Osteopenia "Osteopenia refers to a reduction in bone mineral density (BMD) below normal peak BMD but not low enough to be classified as osteoporosis. According to the WHO, osteopenia is characterized by a value of BMD more than 1 standard deviation below the young adult mean, but less than 2 standard deviations below this value." [HPO:curators]
Show

 HP:0000939 Osteoporosis "Osteoporosis is a systemic skeletal disease characterized by low bone density and microarchitectural deterioration of bone tissue with a consequent increase in bone fragility. According to the WHO, osteoporosis is characterized by a value of BMD 2.5 standard deviations or more below the young adult mean." [HPO:curators]
Show

 HP:0001025 Urticaria 
Show

 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
Show

 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
Show

 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
Show

 HP:0001321 Cerebellar hypoplasia 
Show

 HP:0001428 Somatic mutation 
Show

 HP:0001520 Large for gestational age "The term large for gestational age applies to babies whose birth weight lies above the 90th percentile for that gestational age." [HPO:curators]
Show

 HP:0001643 Patent ductus arteriosus 
Show

 HP:0001723 Restrictive cardiomyopathy 
Show

 HP:0001878 Hemolytic anemia 
Show

 HP:0002002 Deep philtrum 
Show

 HP:0002014 Diarrhea 
Show

 HP:0002027 Abdominal pain 
Show

 HP:0002059 Cerebral atrophy 
Show

 HP:0002094 Dyspnea 
Show

 HP:0002150 Hypercalciuria 
Show

 HP:0002315 Headache "Cephalgia, or pain in the head originating from the cerebral vault." [HPO:curators]
Show

 HP:0002353 EEG abnormalities "Abnormality observed by electroencephalogram (EEG), which is used to record of the brain s spontaneous electrical activity from multiple electrodes placed on the scalp." [HPO:curators]
Show

 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
Show

 HP:0002714 Downturned corners of mouth "A morphological `abnormality of the mouth` (HP:0000153) in which the `angle of the mouth` (FMA:77269) is downturned." [HPO:probinson]
Show

 HP:0002750 Delayed skeletal maturation "A decreased rate of skeletal maturation. Delayed skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
Show

 HP:0002829 Arthralgia 
Show

 HP:0003022 Hypoplasia of the ulna "Underdevelopment of the ulna." [HPO:curators]
Show

 HP:0003186 Inverted nipples "The presence of nipples that instead of pointing outward are retracted inwards." [HPO:sdoelken]
Show

 HP:0003593 Early onset 
Show

 HP:0004818 paroxysmal nocturnal hemoglobinuria 
Show

 HP:0005280 Depressed nasal root and bridge 
Show

 HP:0012378 Fatigue "A subjective feeling of tiredness characterized by a lack of energy and motivation." [HPO:probinson]
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr