ENSMUSG00000017721


Mus musculus

Features
Gene ID: ENSMUSG00000017721
  
Biological name :Pigt
  
Synonyms : GPI transamidase component PIG-T / Pigt / Q8BXQ2
  
Possible biological names infered from orthology : phosphatidylinositol glycan anchor biosynthesis class T / Q969N2
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: H3
Gene start: 164497520
Gene end: 164508301
  
Corresponding Affymetrix probe sets: 10478508 (MoGene1.0st)   1428740_a_at (Mouse Genome 430 2.0 Array)   1437594_x_at (Mouse Genome 430 2.0 Array)   1447382_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000099390
Ensembl peptide - ENSMUSP00000112577
Ensembl peptide - ENSMUSP00000115362
NCBI entrez gene - 78928     See in Manteia.
MGI - MGI:1926178
RefSeq - XM_006500421
RefSeq - NM_133779
RefSeq Peptide - NP_598540
swissprot - B7ZC19
swissprot - Q8BXQ2
swissprot - F6U4X6
Ensembl - ENSMUSG00000017721
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pigtENSDARG00000075842Danio rerio
 PIGTENSGALG00000003909Gallus gallus
 PIGTENSG00000124155Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007245  GPI transamidase component PIG-T


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006506 GPI anchor biosynthetic process IEA
 biological_processGO:0016255 attachment of GPI anchor to protein IEA
 biological_processGO:0030182 neuron differentiation IDA
 biological_processGO:0051402 neuron apoptotic process IDA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IDA
 cellular_componentGO:0042765 GPI-anchor transamidase complex IEA
 molecular_functionGO:0003923 GPI-anchor transamidase activity IMP


Pathways (from Reactome)
Pathway description
Attachment of GPI anchor to uPAR


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0011100 complete preweaning lethality "death of all organisms of a given genotype in a population between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
Show

Allelic Composition: Glt8d2tm1Lex/Glt8d2tm1Lex
Genetic Background: B6;129S5-Glt8d2tm1Lex/Mmucd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr