ENSG00000124253


Homo sapiens

Features
Gene ID: ENSG00000124253
  
Biological name :PCK1
  
Synonyms : P35558 / PCK1 / phosphoenolpyruvate carboxykinase 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: 1
Band: q13.31
Gene start: 57561080
Gene end: 57568112
  
Corresponding Affymetrix probe sets: 208383_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000319814
NCBI entrez gene - 5105     See in Manteia.
OMIM - 614168
RefSeq - NM_002591
RefSeq - XM_011528839
RefSeq Peptide - NP_002582
swissprot - P35558
Ensembl - ENSG00000124253
  
Related genetic diseases (OMIM): 261680 - ?Phosphoenolpyruvate carboxykinase deficiency, cytosolic, 261680
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pck1ENSDARG00000013522Danio rerio
 PCK1ENSGALG00000007636Gallus gallus
 Pck1ENSMUSG00000027513Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PCK2 / Q16822 / phosphoenolpyruvate carboxykinase 2, mitochondrialENSG0000010088970


Protein motifs (from Interpro)
Interpro ID Name
 IPR008209  Phosphoenolpyruvate carboxykinase, GTP-utilising
 IPR008210  Phosphoenolpyruvate carboxykinase, N-terminal
 IPR013035  Phosphoenolpyruvate carboxykinase, C-terminal
 IPR018091  Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site
 IPR035077  Phosphoenolpyruvate carboxykinase, GTP-utilising, C-terminal
 IPR035078  Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006006 glucose metabolic process IEA
 biological_processGO:0006094 gluconeogenesis ISS
 biological_processGO:0006107 oxaloacetate metabolic process IEA
 biological_processGO:0006475 internal protein amino acid acetylation IDA
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0007568 aging IEA
 biological_processGO:0014823 response to activity IEA
 biological_processGO:0032496 response to lipopolysaccharide IEA
 biological_processGO:0032868 response to insulin IDA
 biological_processGO:0032869 cellular response to insulin stimulus IEA
 biological_processGO:0033993 response to lipid IEA
 biological_processGO:0042593 glucose homeostasis IEA
 biological_processGO:0046327 glycerol biosynthetic process from pyruvate IEA
 biological_processGO:0051365 cellular response to potassium ion starvation IEA
 biological_processGO:0061402 positive regulation of transcription from RNA polymerase II promoter in response to acidic pH IEA
 biological_processGO:0070741 response to interleukin-6 IEA
 biological_processGO:0071300 cellular response to retinoic acid IEA
 biological_processGO:0071320 cellular response to cAMP IEA
 biological_processGO:0071332 cellular response to fructose stimulus IEA
 biological_processGO:0071347 cellular response to interleukin-1 IEA
 biological_processGO:0071356 cellular response to tumor necrosis factor IEA
 biological_processGO:0071377 cellular response to glucagon stimulus IEA
 biological_processGO:0071456 cellular response to hypoxia IEA
 biological_processGO:1904640 response to methionine IEA
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0000287 magnesium ion binding IDA
 molecular_functionGO:0004611 phosphoenolpyruvate carboxykinase activity IEA
 molecular_functionGO:0004613 phosphoenolpyruvate carboxykinase (GTP) activity TAS
 molecular_functionGO:0005525 GTP binding IDA
 molecular_functionGO:0016829 lyase activity IEA
 molecular_functionGO:0016831 carboxy-lyase activity IEA
 molecular_functionGO:0017076 purine nucleotide binding IEA
 molecular_functionGO:0019003 GDP binding IEA
 molecular_functionGO:0030145 manganese ion binding IEA
 molecular_functionGO:0031406 carboxylic acid binding IDA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Abacavir metabolism
Transcriptional regulation of white adipocyte differentiation
Gluconeogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000648 Optic atrophy 
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 HP:0000799 Fatty kidneys 
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 HP:0000961 Cyanosis 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001397 Hepatic steatosis 
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 HP:0001399 Hepatic failure 
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 HP:0001943 Hypoglycemia "A lower than normal level of blood glucose." [HPO:curators]
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 HP:0002059 Cerebral atrophy 
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 HP:0002104 Apnea "Lack of breathing with no movement of the respiratory muscles and no exchange of air in the lungs. This term refers to a disposition to have recurrent episodes of apnea rather than to a single event." [HPO:curators]
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 HP:0002353 EEG abnormalities "Abnormality observed by electroencephalogram (EEG), which is used to record of the brain s spontaneous electrical activity from multiple electrodes placed on the scalp." [HPO:curators]
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 HP:0003593 Early onset 
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 HP:0005959 Impaired gluconeogenesis 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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