ENSG00000124299


Homo sapiens

Features
Gene ID: ENSG00000124299
  
Biological name :PEPD
  
Synonyms : P12955 / PEPD / peptidase D
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: -1
Band: q13.11
Gene start: 33386950
Gene end: 33521794
  
Corresponding Affymetrix probe sets: 202108_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000476667
Ensembl peptide - ENSP00000476514
Ensembl peptide - ENSP00000476869
Ensembl peptide - ENSP00000244137
Ensembl peptide - ENSP00000380226
Ensembl peptide - ENSP00000391890
Ensembl peptide - ENSP00000468516
NCBI entrez gene - 5184     See in Manteia.
OMIM - 613230
RefSeq - NM_000285
RefSeq - NM_001166057
RefSeq - NM_001166056
RefSeq Peptide - NP_000276
RefSeq Peptide - NP_001159529
RefSeq Peptide - NP_001159528
swissprot - V9GYL0
swissprot - A0A140VJR2
swissprot - K7ES25
swissprot - P12955
swissprot - V9GY89
swissprot - V9GYE4
Ensembl - ENSG00000124299
  
Related genetic diseases (OMIM): 170100 - Prolidase deficiency, 170100
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PEPDENSDARG00000102249Danio rerio
 PEPDENSGALG00000004899Gallus gallus
 PepdENSMUSG00000063931Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000994  Peptidase M24
 IPR001131  Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site
 IPR007865  Aminopeptidase P, N-terminal
 IPR029149  Creatinase/Aminopeptidase P/Spt16, N-terminal
 IPR036005  Creatinase/aminopeptidase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0006520 cellular amino acid metabolic process TAS
 biological_processGO:0030574 collagen catabolic process IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0004177 aminopeptidase activity IEA
 molecular_functionGO:0004181 metallocarboxypeptidase activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008237 metallopeptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016805 dipeptidase activity IEA
 molecular_functionGO:0030145 manganese ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0102009 proline dipeptidase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000294 Low frontal hairline "A condition in which the scalp hair is present at lower than usual areas of the forehead." [HPO:curators]
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 HP:0000316 Hypertelorism 
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000365 Hearing loss 
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 HP:0000370 Abnormality of the middle ear 
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 HP:0000444 Beaked nose 
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 HP:0000457 Flat nose 
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 HP:0000505 Impaired vision 
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 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
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 HP:0000520 Proptosis 
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 HP:0000670 Carious teeth 
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 HP:0000958 Dry skin 
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 HP:0000963 Thin skin 
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 HP:0000967 Petechiae 
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 HP:0000982 Palmoplantar keratoderma 
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 HP:0000989 Pruritus "Pruritus is an itch or a sensation that makes a person want to scratch. This term refers to an abnormally increased disposition to experience pruritus." [HPO:curators]
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 HP:0000992 Photosensitivity "An increased sensitivity of the skin to light. Photosensitivity may result in a rash upon exposure to the sun (which is known as photodermatosis). Photosensitivity can be diagnosed by phototests in which light is shone on small areas of skin." [HPO:curators]
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 HP:0001166 Arachnodactyly "Abnormally long and slender fingers ("spider fingers")." [HPO:curators]
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 HP:0001231 Abnormality of the fingernails "An abnormality of the `fingernails` (FMA:54327)." [HPO:probinson]
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 HP:0001249 Mental retardation 
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
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 HP:0001873 Thrombocytopenia 
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 HP:0001903 Anemia 
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 HP:0001939 Metabolism abnormality 
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 HP:0001999 Facial dysmorphism 
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 HP:0002099 Asthma "Asthma is characterized by increased responsiveness of the tracheobronchial tree to multiple stimuli, leading to narrowing of the air passages with resultant dyspnea, cough, and wheezing." [HPO:curators]
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 HP:0002162 Low posterior hairline 
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 HP:0002205 Recurrent respiratory infections 
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 HP:0002211 White forelock 
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 HP:0002230 Generalized hirsutism "Abnormally increased hair growth over much of the entire body." [HPO:curators]
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002719 Recurrent infections 
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 HP:0002725 Systemic lupus erythematosus 
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 HP:0002857 Genu valgum 
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 HP:0003196 Nasal hypoplasia "Underdevelopment of the `nose` (FMA:46472)." [HPO:probinson]
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 HP:0003272 Abnormality of the hip "An abnormality of the hip joint or the surrounding anatomic region." [HPO:curators]
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 HP:0004349 Reduced bone mineral density "A reduction of bone mineral density, that is, of the amount of matter per cubic centimeter of bones." [HPO:curators]
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0006528 Chronic lung disease 
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 HP:0006532 Pneumonia, recurrent episodes 
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 HP:0006579 Prolonged neonatal jaundice 
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 HP:0007473 Crusting erythematous dermatitis 
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 HP:0007489 Diffuse telangiectases "Telangiectases (small dilated blood vessels) with a diffuse localization." [HPO:curators]
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 HP:0007598 Bilateral single palmar creases 
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 HP:0007703 Abnormal retinal pigmentation 
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 HP:0010669 Hypoplasia of the zygomatic bone "Underdevelopment of the `zygomatic bone` (FMA:52747)." [HPO:probinson]
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 HP:0010783 Erythema "Redness of the skin, caused by hyperemia of the capillaries in the lower layers of the skin." [HPO:probinson]
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 HP:0011220 Prominent forehead "Forward prominence of the entire forehead, due to protrusion of the frontal bone." [pmid:19125436]
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 HP:0012786 Recurrent cystitis "Repeated infections of the urinary bladder." [HPO:probinson, pmid:20639019]
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 HP:0200034 skin papules "A circumscribed, solid elevation of skin with no visible fluid, varying in size from a pinhead to less than 10mm in diameter at the widest point." [HPO:SKOEHLER]
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 HP:0200042 skin ulcer "A discontinuity of the skin exhibiting complete loss of the epidermis and often portions of the dermis and even subcutaneous fat." [HPO:SKOEHLER]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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