ENSG00000125779


Homo sapiens

Features
Gene ID: ENSG00000125779
  
Biological name :PANK2
  
Synonyms : PANK2 / pantothenate kinase 2 / Q9BZ23
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: 1
Band: p13
Gene start: 3888839
Gene end: 3929882
  
Corresponding Affymetrix probe sets: 218809_at (Human Genome U133 Plus 2.0 Array)   228735_s_at (Human Genome U133 Plus 2.0 Array)   228965_s_at (Human Genome U133 Plus 2.0 Array)   228966_at (Human Genome U133 Plus 2.0 Array)   238548_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000495157
Ensembl peptide - ENSP00000313377
Ensembl peptide - ENSP00000417609
Ensembl peptide - ENSP00000476745
Ensembl peptide - ENSP00000477229
Ensembl peptide - ENSP00000496112
Ensembl peptide - ENSP00000477429
Ensembl peptide - ENSP00000481523
NCBI entrez gene - 80025     See in Manteia.
OMIM - 606157
RefSeq - XM_017028079
RefSeq - NM_001324191
RefSeq - NM_001324193
RefSeq - NM_024960
RefSeq - NM_153638
RefSeq - NM_153640
RefSeq - XM_005260835
RefSeq - XM_005260836
RefSeq - XM_011529364
RefSeq - XM_017028077
RefSeq - XM_017028078
RefSeq Peptide - NP_705902
RefSeq Peptide - NP_705904
RefSeq Peptide - NP_001311120
RefSeq Peptide - NP_001311122
RefSeq Peptide - NP_079236
swissprot - Q9BZ23
swissprot - V9GYZ0
swissprot - V9GYH1
Ensembl - ENSG00000125779
  
Related genetic diseases (OMIM): 234200 - Neurodegeneration with brain iron accumulation 1, 234200
  607236 - HARP syndrome, 607236
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PANK2ENSGALG00000015978Gallus gallus
 Pank2ENSMUSG00000037514Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PANK1 / Q8TE04 / pantothenate kinase 1ENSG0000015278256
PANK3 / Q9H999 / pantothenate kinase 3ENSG0000012013752
PANK4 / Q9NVE7 / pantothenate kinase 4ENSG000001578815


Protein motifs (from Interpro)
Interpro ID Name
 IPR004567  Type II pantothenate kinase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007286 spermatid development IEA
 biological_processGO:0009060 aerobic respiration IEA
 biological_processGO:0009108 coenzyme biosynthetic process TAS
 biological_processGO:0015937 coenzyme A biosynthetic process IEA
 biological_processGO:0015939 pantothenate metabolic process NAS
 biological_processGO:0016310 phosphorylation IEA
 biological_processGO:0019217 regulation of fatty acid metabolic process IMP
 biological_processGO:0051881 regulation of mitochondrial membrane potential IEA
 biological_processGO:0070584 mitochondrion morphogenesis IEA
 biological_processGO:0090207 regulation of triglyceride metabolic process IMP
 biological_processGO:1904251 regulation of bile acid metabolic process IMP
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion NAS
 cellular_componentGO:0005758 mitochondrial intermembrane space TAS
 cellular_componentGO:0005829 cytosol IDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004594 pantothenate kinase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Coenzyme A biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000020 Urinary incontinence "Loss of the ability to control the urinary bladder leading to involuntary urination." [HPO:sdoelken]
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 HP:0000157 Abnormality of the tongue "Any abnormality of the tongue." [HPO:curators]
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 HP:0000273 Facial grimacing 
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 HP:0000298 Mask-like facies 
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 HP:0000488 Retinopathy 
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 HP:0000510 Retinitis pigmentosa "Hereditary degeneration and atrophy of the retina." [HPO:curators]
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 HP:0000543 Pale optic disks 
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 HP:0000546 Retinal degeneration 
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 HP:0000580 Pigmentary retinopathy 
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 HP:0000618 Blindness 
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 HP:0000643 Blepharospasm "An involuntary recurrent spasm of both eyelids." [HPO:curators]
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 HP:0000648 Optic atrophy 
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 HP:0000658 Eyelid apraxia 
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 HP:0000709 Psychosis "A condition characterized by changes of personality and thought patterns often accompanied by hallucinations and delusional beliefs." [HPO:curators]
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 HP:0000712 Emotional lability 
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 HP:0000716 Depression "A condition characterized by pervasive dysphoric mood, loss of interests, and inability to experience pleasure." [HPO:curators]
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 HP:0000722 Obsessive-compulsive disorder 
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 HP:0000726 Dementia 
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 HP:0000737 Irritability 
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 HP:0000752 Hyperactivity 
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 HP:0000953 Hyperpigmentation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001266 Choreoathetosis 
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 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
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 HP:0001300 Parkinsonism 
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 HP:0001332 Dystonia "An abnormally increased muscular tone that causes fixed abnormal postures. There is a slow, intermittent twisting motion that leads to exaggerated turning and posture of the extremities and trunk." [HPO:curators]
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 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001618 Dysphonia 
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 HP:0001760 Abnormality of the feet "An abnormality of the feet (foot deformity) is a disorder of the foot that can either be congenital or acquired. Such deformities can include hammer toe, club foot deformity, flat feet, pes cavus, Congenital vertical talus (rocker bottom foot) & etc." [HPO:curators]
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 HP:0001824 Weight loss 
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 HP:0001927 Red cell acanthocytosis "Acanthocytosis refers to an abnormal morphiology of red-blood cells characterized by the presence of spikes on the cell surface. The cells have an irregular shaped resembling many-pointed stars." [HPO:curators]
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 HP:0002015 Dysphagia "Difficulty in swallowing." [HPO:curators]
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 HP:0002063 Rigidity 
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 HP:0002067 Bradykinesia "Bradykinesia literally means slow movement, and is used clinically to denote a slowness in the execution of movement (in contrast to hypokinesia, which is used to refer to slowness in the initiation of movement)." [HPO:curators]
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 HP:0002072 Chorea "Chorea (Greek for dance ) refers to widespread arrhythmic involuntary movements of a forcible, jerky and restless fashion." [HPO:curators]
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 HP:0002179 Opisthotonus 
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 HP:0002180 Neurodegeneration 
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 HP:0002283 Diffuse brain atrophy 
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 HP:0002304 Akinesia 
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 HP:0002310 Orofacial dyskinesia 
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 HP:0002312 Clumsiness 
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 HP:0002359 Frequent falls 
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 HP:0002451 Limb dystonia 
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 HP:0002454 MRI shows decreased signal intensity in the pallidal nuclei with central hyperintensity ( eye of the tiger sign) 
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 HP:0002533 Abnormal posturing 
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 HP:0002540 Inability to walk 
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 HP:0002659 Increased susceptibility to fractures "An abnormally increased tendency to fractures of bones caused by an abnormal reduction in bone strength that is generally associated with an increased risk of fracture." [HPO:sdoelken]
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 HP:0003198 Myopathy 
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 HP:0003199 Decreased muscle mass 
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 HP:0003552 Muscle stiffness 
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 HP:0003563 Hypobetalipoproteinemia 
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 HP:0003621 Juvenile onset 
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 HP:0003677 Slow progression 
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 HP:0003678 Rapidly progressive 
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 HP:0007018 Attention deficit hyperactivity disorder "Attention deficit hyperactivity disorder (ADHD) manifests at age 2-3 years or by first grade at the latest. The main symptoms are distractibility, impulsivity, hyperactivity, and often trouble organizing tasks and projects, difficulty going to sleep, and social problems from being aggressive, loud, or impatient." [HPO:curators]
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 HP:0007132 Pallidal degeneration 
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 HP:0007256 Mild pyramidal signs 
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 HP:0007313 Cerebral degeneration 
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 HP:0007325 Generalized dystonia 
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 HP:0008760 Violent behavior 
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 HP:0008770 Obsessive-compulsive trait "The presence of one or more obsessive-compulsive personality traits. Obsessions refer to persistent intrusive thoughts, and compulsions to intrusive behaviors, which the affected person experiences as involuntary, senseless, or repugnant." [HPO:curators]
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 HP:0008872 Feeding problems in infancy 
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 HP:0011951 Aspiration pneumonia "Pneumonia due to the aspiration (breathing in) of food, liquid, or gastric contents into the upper respiratory tract." [HPO:probinson]
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 HP:0012048 Oromandibular dystonia "A kind of focal dystonia characterized by forceful contractions of the face, jaw, and/or tongue causing difficulty in opening and closing the mouth and often affecting chewing and speech." [HPO:probinson]
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 HP:0012473 Tongue atrophy "Wasting of the `tongue` (FMA:54640)." [ORCID:0000-0001-5208-3432]
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 HP:0012675 Iron accumulation in brain "An abnormal build up of iron (Fe) in brain tissue." [HPO:probinson]
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 HP:0012735 Cough "A sudden, audible expulsion of air from the lungs through a partially closed glottis, preceded by inhalation." [HPO:probinson]
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 HP:0030216 Inertia "Reduction of goal-directed behaviors linked to the impairment in frontal executive functions (planning of an action for example)." [ICM:PCaroppo]
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 HP:0040083 Toe walking 
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 HP:0100034 Motor tics "Movement-based tics affecting discrete muscle groups." [HPO:sdoelken]
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 HP:0100543 Cognitive impairment "Abnormality in the process of thought including the ability to process information." [HPO:sdoelken]
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 HP:0100710 Impulsivity 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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