ENSG00000125863


Homo sapiens

Features
Gene ID: ENSG00000125863
  
Biological name :MKKS
  
Synonyms : McKusick-Kaufman syndrome / MKKS / Q9NPJ1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: -1
Band: p12.2
Gene start: 10401009
Gene end: 10434222
  
Corresponding Affymetrix probe sets: 218138_at (Human Genome U133 Plus 2.0 Array)   222530_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000246062
Ensembl peptide - ENSP00000382008
NCBI entrez gene - 8195     See in Manteia.
OMIM - 604896
RefSeq - NM_018848
RefSeq - NM_170784
RefSeq Peptide - NP_061336
RefSeq Peptide - NP_740754
swissprot - Q9NPJ1
Ensembl - ENSG00000125863
  
Related genetic diseases (OMIM): 236700 - McKusick-Kaufman syndrome, 236700
  605231 - Bardet-Biedl syndrome 6, 605231
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mkksENSDARG00000016139Danio rerio
 MKKSENSGALG00000009013Gallus gallus
 MkksENSMUSG00000027274Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002423  Chaperonin Cpn60/TCP-1 family
 IPR027409  GroEL-like apical domain superfamily
 IPR027413  GroEL-like equatorial domain superfamily
 IPR028790  McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001947 heart looping ISS
 biological_processGO:0006457 protein folding TAS
 biological_processGO:0006458 "de novo" protein folding IBA
 biological_processGO:0007286 spermatid development ISS
 biological_processGO:0007368 determination of left/right symmetry ISS
 biological_processGO:0007507 heart development TAS
 biological_processGO:0007601 visual perception IEA
 biological_processGO:0007608 sensory perception of smell ISS
 biological_processGO:0008406 gonad development TAS
 biological_processGO:0010629 negative regulation of gene expression IEA
 biological_processGO:0014824 artery smooth muscle contraction IEA
 biological_processGO:0021756 striatum development ISS
 biological_processGO:0021766 hippocampus development ISS
 biological_processGO:0021987 cerebral cortex development ISS
 biological_processGO:0030837 negative regulation of actin filament polymerization IEA
 biological_processGO:0032402 melanosome transport ISS
 biological_processGO:0033210 leptin-mediated signaling pathway IEA
 biological_processGO:0034260 negative regulation of GTPase activity IEA
 biological_processGO:0035176 social behavior ISS
 biological_processGO:0038108 negative regulation of appetite by leptin-mediated signaling pathway ISS
 biological_processGO:0040018 positive regulation of multicellular organism growth IEA
 biological_processGO:0042311 vasodilation IEA
 biological_processGO:0044321 response to leptin IEA
 biological_processGO:0045444 fat cell differentiation ISS
 biological_processGO:0045494 photoreceptor cell maintenance ISS
 biological_processGO:0045776 negative regulation of blood pressure IEA
 biological_processGO:0046907 intracellular transport ISS
 biological_processGO:0048854 brain morphogenesis ISS
 biological_processGO:0050896 response to stimulus IEA
 biological_processGO:0050910 detection of mechanical stimulus involved in sensory perception of sound ISS
 biological_processGO:0051131 chaperone-mediated protein complex assembly IEA
 biological_processGO:0051216 cartilage development IEA
 biological_processGO:0051492 regulation of stress fiber assembly IEA
 biological_processGO:0051877 pigment granule aggregation in cell center ISS
 biological_processGO:0060027 convergent extension involved in gastrulation ISS
 biological_processGO:0060271 cilium assembly ISS
 biological_processGO:0060296 regulation of cilium beat frequency involved in ciliary motility ISS
 biological_processGO:0060324 face development IEA
 biological_processGO:0061077 chaperone-mediated protein folding IBA
 biological_processGO:1905515 non-motile cilium assembly IEA
 cellular_componentGO:0005622 intracellular IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005813 centrosome IDA
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0031514 motile cilium ISS
 cellular_componentGO:0036064 ciliary basal body IBA
 cellular_componentGO:1902636 kinociliary basal body IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0001103 RNA polymerase II repressing transcription factor binding IPI
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0044183 protein binding involved in protein folding IBA
 molecular_functionGO:0051082 unfolded protein binding IBA


Pathways (from Reactome)
Pathway description
BBSome-mediated cargo-targeting to cilium


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000003 Multicystic kidney "Multicystic dysplasia of the kidney is characterized by multiple cysts of varying size in the kidney and the absence of a normal pelvocaliceal system. The condition is associated with ureteral or ureteropelvic atresia, and the affected kidney is nonfunctional." [HPO:curators]
Show

 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
Show

 HP:0000047 Hypospadias "Displacement of the urethral opening on the ventral (inferior) surface of the penis." [HPO:curators]
Show

 HP:0000054 Micropenis 
Show

 HP:0000072 Hydroureter "The distention of the ureter with urine." [HPO:curators]
Show

 HP:0000077 Abnormality of the kidneys "An abnormality of the kidneys, the paired organs whose primary function is the production of urine." [HPO:curators]
Show

 HP:0000100 Nephrotic syndrome 
Show

 HP:0000107 Renal cysts 
Show

 HP:0000113 Polycystic kidney 
Show

 HP:0000126 Hydronephrosis 
Show

 HP:0000135 Hypogonadism "Reduced function of the gonads (testes in males or ovaries in females)." [HPO:curators]
Show

 HP:0000137 Abnormality of the ovaries 
Show

 HP:0000143 Rectovaginal fistula "The presence of a fistula between the rectum and the vagina." [HPO:curators]
Show

 HP:0000145 Transverse vaginal septum 
Show

 HP:0000148 Vaginal atresia 
Show

 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
Show

 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
Show

 HP:0000256 Macrocephaly "The presence of an abnormally large `skull` (FMA:46565)." [HPO:probinson]
Show

 HP:0000365 Hearing loss 
Show

 HP:0000368 Low-set, posteriorly rotated ears 
Show

 HP:0000426 Prominent nasal bridge 
Show

 HP:0000470 Short neck 
Show

 HP:0000483 Astigmatism 
Show

 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
Show

 HP:0000494 Downward slanting palpebral fissures 
Show

 HP:0000501 Glaucoma "Glaucoma refers loss of retinal ganglion cells in a characteristic pattern of optic neuropathy usually associated with increased intraocular pressure." [HPO:curators]
Show

 HP:0000510 Retinitis pigmentosa "Hereditary degeneration and atrophy of the retina." [HPO:curators]
Show

 HP:0000512 Abnormal electroretinogram "Any abnormality of the electrical responses of various cell types in the retina as measured by electroretinography." [HPO:curators]
Show

 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
Show

 HP:0000545 Myopia 
Show

 HP:0000546 Retinal degeneration 
Show

 HP:0000580 Pigmentary retinopathy 
Show

 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
Show

 HP:0000668 Hypodontia "Hypodontia describes a situation when there are fewer than the normal number of teeth, whereby 6 teeth or fewer teeth are missing (oligodontia refers to the condition of missing more than 6 teeth and the congenital absence of all teeth is called anodontia)." [HPO:curators]
Show

 HP:0000678 Dental overcrowding 
Show

 HP:0000750 Impaired language development 
Show

 HP:0000807 Glandular hypospadias 
Show

 HP:0000819 Diabetes mellitus 
Show

 HP:0000822 Hypertension "High blood pressure." [HPO:curators]
Show

 HP:0000969 Edema "An abnormal accumulation of fluid beneath the skin, or in one or more cavities of the body. Edema may be related to one or more of the following factors: 1) increased capillary hydrostatic pressure, 2) decreased osmotic pressure of plasma, 3) decreased tissue tension and lymphatic drainage, 4) increased osmotic pressure of tissue fluids, and 5) increased capillary permeability." [HPO:curators]
Show

 HP:0001007 Hirsutism "Abnormally increased hair growth." [HPO:curators]
Show

 HP:0001080 Biliary tract abnormality 
Show

 HP:0001156 Brachydactyly 
Show

 HP:0001159 Syndactyly "Webbing or fusion of the fingers or toes, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the fingers or toes in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
Show

 HP:0001162 Postaxial polydactyly (hands) "Supernumerary digits located at the ulnar side of the hand." [HPO:curators]
Show

 HP:0001163 Abnormality of the metacarpal bones 
Show

 HP:0001249 Mental retardation 
Show

 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
Show

 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
Show

 HP:0001328 Learning disability 
Show

 HP:0001374 Congenital hip dislocation 
Show

 HP:0001395 Hepatic fibrosis 
Show

 HP:0001508 Failure to thrive 
Show

 HP:0001513 Obesity "A status with BODY WEIGHT that is grossly above the acceptable or desirable weight, usually due to accumulation of excess FATS in the body. The standards may vary with age, sex, genetic or cultural background. In the BODY MASS INDEX, a BMI greater than 30.0 kg/m2 is considered obese, and a BMI greater than 40.0 kg/m2 is considered morbidly obese (MORBID OBESITY)." [MeSH:D009765]
Show

 HP:0001586 Vesicovaginal fistula 
Show

 HP:0001629 Ventricular septal defect "A hole between the two bottom chambers (ventricles) of the heart. The defect is centered around the most superior aspect of the ventricular septum." [HPO:curators]
Show

 HP:0001631 Atrial septal defect "Atrial septal defect (ASD) is a congenital heart defect that enables blood flow between the left and right atria via the interatrial septum. The three common types of ASD are sinus venosus defects, ostium secundum defects, and ostium primum defects." [HPO:curators]
Show

 HP:0001636 Tetralogy of Fallot "A congenital cardiac malformation comprising pulmonary stenosis, overriding aorta, ventricular septum defect, and right ventricular hypertrophy. The diagnosis of TOF is made if at least three of the four above mentioned features are present." [HPO:curators]
Show

 HP:0001643 Patent ductus arteriosus 
Show

 HP:0001712 Left ventricular hypertrophy 
Show

 HP:0001769 Broad feet "Increased width of the feet." [HPO:curators]
Show

 HP:0001773 Short, broad feet "Abnormally short and wide feet." [HPO:curators]
Show

 HP:0001829 Polydactyly (feet) 
Show

 HP:0001830 Postaxial polydactyly (feet) "Polydactyly of the foot most commonly refers to the presence of six toes on one foot. Postaxial polydactyly affects the lateral ray and the duplication may range from a well-formed articulated digit to a rudimentary digit." [HPO:curators]
Show

 HP:0002023 Anal atresia "Congenital absence of the anus, i.e., the opening at the bottom end of the intestinal tract." [HPO:curators]
Show

 HP:0002089 Pulmonary hypoplasia 
Show

 HP:0002099 Asthma "Asthma is characterized by increased responsiveness of the tracheobronchial tree to multiple stimuli, leading to narrowing of the air passages with resultant dyspnea, cough, and wheezing." [HPO:curators]
Show

 HP:0002141 Gait imbalance 
Show

 HP:0002167 Neurological speech impairment 
Show

 HP:0002230 Generalized hirsutism "Abnormally increased hair growth over much of the entire body." [HPO:curators]
Show

 HP:0002251 Congenital megacolon "An abnormality resulting from a lack of intestinal ganglion cells (i.e., an aganglionic section of bowel) that results in bowel obstruction with enlargement of the colon." [HPO:curators]
Show

 HP:0002370 Poor coordination 
Show

 HP:0002705 High, narrow palate "The presence of a high and narrow palate." [HPO:curators]
Show

 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
Show

 HP:0003241 Genital hypoplasia 
Show

 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
Show

 HP:0004383 Hypoplastic left heart 
Show

 HP:0004397 Ectopic anus "Abnormal displacement or malposition of the anus." [HPO:curators]
Show

 HP:0006101 Finger syndactyly "Webbing or fusion of the fingers, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the fingers in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
Show

 HP:0006159 Central polydactyly (hands) 
Show

 HP:0008368 Synostosis involving tarsal bones 
Show

 HP:0008678 Renal hypoplasia/aplasia 
Show

 HP:0008724 Hypoplastic ovary 
Show

 HP:0008734 Decreased testicular size 
Show

 HP:0008736 Hypoplasia of penis 
Show

 HP:0009466 Radial deviation of fingers 
Show

 HP:0009806 Nephrogenic diabetes insipidus "A form of diabetes insipidus caused by failure of the kidneys to respond to vasopressin (AVP)." [HPO:curators]
Show

 HP:0010442 Polydactyly 
Show

 HP:0010741 Edema of the lower limbs 
Show

 HP:0010747 Medial flaring of the eyebrow "An abnormal distribution of eyebrow hair growth in the medial direction." [HPO:probinson]
Show

 HP:0012227 Urethral stricture "Narrowing of the urethra associated with inflammation or scar tissue." [HPO:probinson]
Show

 HP:0030010 Hydrometrocolpos "Hydrometrocolpos is an accumulation of uterine and vaginal secretions as well as menstrual blood in the uterus and vagina." []
Show

 HP:0030680 Abnormality of cardiovascular system morphology "Any structural anomaly of the heart and great vessels." []
Show

 HP:0100779 Urogenital sinus anomaly "A rare birth defect in women where the urethra and vagina both open into a common channel." [HPO:curators]
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr