ENSG00000126226


Homo sapiens

Features
Gene ID: ENSG00000126226
  
Biological name :PCID2
  
Synonyms : PCID2 / PCI domain containing 2 / Q5JVF3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 13
Strand: -1
Band: q34
Gene start: 113177539
Gene end: 113208715
  
Corresponding Affymetrix probe sets: 219940_s_at (Human Genome U133 Plus 2.0 Array)   225149_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000479494
Ensembl peptide - ENSP00000364626
Ensembl peptide - ENSP00000364628
Ensembl peptide - ENSP00000246505
Ensembl peptide - ENSP00000337405
Ensembl peptide - ENSP00000364606
Ensembl peptide - ENSP00000364608
NCBI entrez gene - 55795     See in Manteia.
OMIM - 613713
RefSeq - NM_018386
RefSeq - XM_017020669
RefSeq - NM_001127202
RefSeq - NM_001127203
RefSeq - NM_001258213
RefSeq - NM_001320655
RefSeq - NM_001320656
RefSeq - NM_001320657
RefSeq - NM_001320659
RefSeq - NM_001320660
RefSeq - XM_017020664
RefSeq - XM_017020665
RefSeq - XM_017020666
RefSeq - XM_017020667
RefSeq - XM_017020668
RefSeq Peptide - NP_001307586
RefSeq Peptide - NP_001307588
RefSeq Peptide - NP_001307589
RefSeq Peptide - NP_001340021
RefSeq Peptide - NP_060856
RefSeq Peptide - NP_001307584
RefSeq Peptide - NP_001307585
RefSeq Peptide - NP_001120674
RefSeq Peptide - NP_001120675
RefSeq Peptide - NP_001245142
swissprot - Q5JVF3
swissprot - A0A024RE04
Ensembl - ENSG00000126226
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pcid2ENSDARG00000013802Danio rerio
 PCID2ENSGALG00000016831Gallus gallus
 Pcid2ENSMUSG00000038542Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000717  Proteasome component (PCI) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000973 posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery IBA
 biological_processGO:0006368 transcription elongation from RNA polymerase II promoter IBA
 biological_processGO:0016973 poly(A)+ mRNA export from nucleus IBA
 biological_processGO:0043066 negative regulation of apoptotic process IMP
 biological_processGO:0043488 regulation of mRNA stability IMP
 biological_processGO:0045579 positive regulation of B cell differentiation IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0048536 spleen development ISS
 biological_processGO:0071033 nuclear retention of pre-mRNA at the site of transcription IBA
 biological_processGO:0090267 positive regulation of mitotic cell cycle spindle assembly checkpoint IMP
 biological_processGO:2000117 negative regulation of cysteine-type endopeptidase activity IMP
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005643 nuclear pore IBA
 cellular_componentGO:0035327 transcriptionally active chromatin IBA
 cellular_componentGO:0070390 transcription export complex 2 IBA
 molecular_functionGO:0003690 double-stranded DNA binding IBA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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