ENSG00000127838


Homo sapiens

Features
Gene ID: ENSG00000127838
  
Biological name :PNKD
  
Synonyms : paroxysmal nonkinesigenic dyskinesia / PNKD / Q8N490
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: 1
Band: q35
Gene start: 218270392
Gene end: 218346793
  
Corresponding Affymetrix probe sets: 1555713_at (Human Genome U133 Plus 2.0 Array)   225298_at (Human Genome U133 Plus 2.0 Array)   233177_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000414400
Ensembl peptide - ENSP00000248451
Ensembl peptide - ENSP00000258362
Ensembl peptide - ENSP00000273077
NCBI entrez gene - 25953     See in Manteia.
OMIM - 609023
RefSeq - XM_017003772
RefSeq - NM_001077399
RefSeq - NM_015488
RefSeq - NM_022572
RefSeq - XM_017003771
RefSeq Peptide - NP_056303
RefSeq Peptide - NP_072094
RefSeq Peptide - NP_001070867
swissprot - Q8N490
swissprot - A0A024R415
Ensembl - ENSG00000127838
  
Related genetic diseases (OMIM): 118800 - Paroxysmal nonkinesigenic dyskinesia 1, 118800
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pnkdENSDARG00000071032Danio rerio
 PNKDENSGALG00000022166Gallus gallus
 PnkdENSMUSG00000026179Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HAGH / Q16775 / hydroxyacylglutathione hydrolaseENSG0000006385430
HAGHL / Q6PII5 / hydroxyacylglutathione hydrolase likeENSG0000010325327
ETHE1 / O95571 / ETHE1, persulfide dioxygenaseENSG0000010575516


Protein motifs (from Interpro)
Interpro ID Name
 IPR001279  Metallo-beta-lactamase
 IPR017782  Hydroxyacylglutathione hydrolase
 IPR031833  Protein of unknown function DUF4748
 IPR032282  Hydroxyacylglutathione hydrolase, C-terminal domain
 IPR035680  Hydroxyacylglutathione hydrolase, MBL domain
 IPR036866  Ribonuclease Z/Hydroxyacylglutathione hydrolase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione IEA
 biological_processGO:0032225 regulation of synaptic transmission, dopaminergic IEA
 biological_processGO:0042053 regulation of dopamine metabolic process IEA
 biological_processGO:0046929 negative regulation of neurotransmitter secretion IMP
 biological_processGO:0050884 neuromuscular process controlling posture IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0016020 membrane IDA
 molecular_functionGO:0004416 hydroxyacylglutathione hydrolase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
Show

 HP:0000211 Trismus "Limitation in the ability to open the mouth." [HPO:curators]
Show

 HP:0000273 Facial grimacing 
Show

 HP:0000473 Torticollis 
Show

 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
Show

 HP:0001266 Choreoathetosis 
Show

 HP:0001387 Joint stiffness "Joint stiffness is a perceived sensation of tightness in a joint or joints when attempting to move them after a period of inactivity. Joint stiffness typically subsides over time." [HPO:curators]
Show

 HP:0002015 Dysphagia "Difficulty in swallowing." [HPO:curators]
Show

 HP:0002063 Rigidity 
Show

 HP:0002094 Dyspnea 
Show

 HP:0002167 Neurological speech impairment 
Show

 HP:0002268 Dystonia, paroxysmal 
Show

 HP:0002411 Myokymia 
Show

 HP:0002487 Hyperkinesis 
Show

 HP:0003324 Generalized muscle weakness "Generalized weakness or decreased strength of the muscles." [HPO:curators]
Show

 HP:0003593 Early onset 
Show

 HP:0007098 Choreoathetosis, paroxysmal 
Show

 HP:0007166 Involuntary dystonic or choreiform movements 
Show

 HP:0011463 Childhood onset "Onset of disease at the age of between 1 and 5 years." [DDD:hfirth]
Show

 HP:0025401 Staring gaze "An abnormality in which the eyes are held permanently wide open." [PMID:22675666]
Show

 HP:0100660 Dyskinesis "A movement disorder which consists of effects including diminished voluntary movements and the presence of involuntary movements." [HPO:sdoelken]
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr