ENSG00000129667


Homo sapiens

Features
Gene ID: ENSG00000129667
  
Biological name :RHBDF2
  
Synonyms : Q6PJF5 / RHBDF2 / rhomboid 5 homolog 2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: q25.1
Gene start: 76470891
Gene end: 76501790
  
Corresponding Affymetrix probe sets: 219202_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000467971
Ensembl peptide - ENSP00000467549
Ensembl peptide - ENSP00000467677
Ensembl peptide - ENSP00000322775
Ensembl peptide - ENSP00000464942
Ensembl peptide - ENSP00000464975
Ensembl peptide - ENSP00000465124
Ensembl peptide - ENSP00000465531
Ensembl peptide - ENSP00000465632
Ensembl peptide - ENSP00000465990
Ensembl peptide - ENSP00000466029
Ensembl peptide - ENSP00000466867
Ensembl peptide - ENSP00000467468
NCBI entrez gene - 79651     See in Manteia.
OMIM - 614404
RefSeq - XM_017025079
RefSeq - NM_001005498
RefSeq - NM_024599
RefSeq - XM_005257669
RefSeq - XM_005257670
RefSeq - XM_011525249
RefSeq - XM_011525250
RefSeq - XM_011525251
RefSeq Peptide - NP_078875
RefSeq Peptide - NP_001005498
swissprot - Q6PJF5
swissprot - K7EIY3
swissprot - K7EJ10
swissprot - K7EJD6
swissprot - K7EKA3
swissprot - K7EKI1
swissprot - K7ELA9
swissprot - K7EPN8
swissprot - K7EQ53
swissprot - K7EPV3
swissprot - K7EQT5
Ensembl - ENSG00000129667
  
Related genetic diseases (OMIM): 148500 - Tylosis with esophageal cancer, 148500
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RHBDF2ENSGALG00000001943Gallus gallus
 Q80WQ6ENSMUSG00000020806Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q96CC6 / RHBDF1 / rhomboid 5 homolog 1ENSG0000000738457


Protein motifs (from Interpro)
Interpro ID Name
 IPR002610  Peptidase S54, rhomboid
 IPR022241  Rhomboid serine protease
 IPR022764  Peptidase S54, rhomboid domain
 IPR035952  Rhomboid-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0042058 regulation of epidermal growth factor receptor signaling pathway IBA
 biological_processGO:0050708 regulation of protein secretion IBA
 biological_processGO:0050709 negative regulation of protein secretion ISS
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IBA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004252 serine-type endopeptidase activity IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0019838 growth factor binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000153 Abnormality of the mouth "An abnormality of the `mouth` (FMA:49184)." [HPO:probinson]
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 HP:0000982 Palmoplantar keratoderma 
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 HP:0001036 Parakeratosis 
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 HP:0001541 Ascites 
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 HP:0001824 Weight loss 
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 HP:0002015 Dysphagia "Difficulty in swallowing." [HPO:curators]
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 HP:0002017 Nausea and vomiting 
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 HP:0002020 Gastroesophageal reflux 
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 HP:0002033 Poor suck "An inadequate sucking reflex, resulting in the difficult of newborns to be breast-fed." [HPO:curators]
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 HP:0002239 Gastrointestinal hemorrhage 
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002250 Abnormality of the large intestine "Any abnormality of the large intestine, which consists of the cecum and colon." [HPO:curators]
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 HP:0002664 Neoplasia "An organ or organ-system abnormality that consists of uncontrolled autonomous cell-proliferation which can occur in any part of the body as a benign or malignant tumour or neoplasm." [HPO:curators]
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 HP:0004396 Poor appetite 
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 HP:0007447 Hyperkeratosis, diffuse palmoplantar 
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 HP:0011459 Esophageal carcinoma "The presence of a `carcinoma` (MPATH:549) of the `esophagus` (FMA:7131)." [DDD:hfirth]
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 HP:0045026 Abnormality of the mediastinum 
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 HP:0100751 Esophageal neoplasm 
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 HP:0100760 Clubbing of toes "Terminal broadening of the toes (distal phalanges of the toes)." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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