ENSG00000130005


Homo sapiens

Features
Gene ID: ENSG00000130005
  
Biological name :GAMT
  
Synonyms : GAMT / guanidinoacetate N-methyltransferase / Q14353
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: -1
Band: p13.3
Gene start: 1397026
Gene end: 1401570
  
Corresponding Affymetrix probe sets: 1552473_at (Human Genome U133 Plus 2.0 Array)   1552474_a_at (Human Genome U133 Plus 2.0 Array)   205354_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000492031
Ensembl peptide - ENSP00000252288
Ensembl peptide - ENSP00000403536
Ensembl peptide - ENSP00000466341
NCBI entrez gene - 2593     See in Manteia.
OMIM - 601240
RefSeq - NM_138924
RefSeq - NM_000156
RefSeq Peptide - NP_000147
RefSeq Peptide - NP_620279
swissprot - V9HWB2
swissprot - A0A1W2PR36
swissprot - K7EM34
swissprot - Q14353
Ensembl - ENSG00000130005
  
Related genetic diseases (OMIM): 612736 - Cerebral creatine deficiency syndrome 2, 612736
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gamtENSDARG00000070844Danio rerio
 GAMTENSGALG00000040182Gallus gallus
 GamtENSMUSG00000020150Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR016550  Guanidinoacetate N-methyltransferase
 IPR026480  Arginine N-methyltransferase 2-like domain
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006600 creatine metabolic process TAS
 biological_processGO:0006601 creatine biosynthetic process TAS
 biological_processGO:0006936 muscle contraction TAS
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0009887 animal organ morphogenesis IEA
 biological_processGO:0032259 methylation IEA
 biological_processGO:0040014 regulation of multicellular organism growth IEA
 biological_processGO:0046498 S-adenosylhomocysteine metabolic process IBA
 biological_processGO:0046500 S-adenosylmethionine metabolic process IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0008168 methyltransferase activity TAS
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0030731 guanidinoacetate N-methyltransferase activity IMP


Pathways (from Reactome)
Pathway description
Creatine metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000750 Impaired language development 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001276 Hypertonia 
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 HP:0001336 Myoclonus "Very brief, involuntary random muscular contractions occurring at rest, in response to sensory stimuli, or accompanying voluntary movements." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0007153 Progressive extrapyramidal movement disorder 
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 HP:0008947 Infantile muscular hypotonia "Muscular hypotonia (abnormally low muscle tone) manifesting in infancy." [HPO:curators]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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