ENSG00000130956


Homo sapiens

Features
Gene ID: ENSG00000130956
  
Biological name :HABP4
  
Synonyms : HABP4 / hyaluronan binding protein 4 / Q5JVS0
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: 1
Band: q22.32
Gene start: 96450201
Gene end: 96491336
  
Corresponding Affymetrix probe sets: 209818_s_at (Human Genome U133 Plus 2.0 Array)   209819_at (Human Genome U133 Plus 2.0 Array)   232341_x_at (Human Genome U133 Plus 2.0 Array)   233919_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000364398
Ensembl peptide - ENSP00000364400
NCBI entrez gene - 22927     See in Manteia.
OMIM - 617369
RefSeq - XM_017014484
RefSeq - NM_014282
RefSeq - XM_005251812
RefSeq Peptide - NP_055097
swissprot - Q5JVS0
Ensembl - ENSG00000130956
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zgc:103482ENSDARG00000025174Danio rerio
 HABP4ENSGALG00000012628Gallus gallus
 Habp4ENSMUSG00000021476Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8NC51 / SERBP1 / SERPINE1 mRNA binding protein 1ENSG0000014286441


Protein motifs (from Interpro)
Interpro ID Name
 IPR006861  Hyaluronan/mRNA-binding protein
 IPR032381  Intracellular hyaluronan-binding protein 4, N-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002576 platelet degranulation TAS
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0033120 positive regulation of RNA splicing IMP
 biological_processGO:0043392 negative regulation of DNA binding IDA
 biological_processGO:0045948 positive regulation of translational initiation IMP
 biological_processGO:0071260 cellular response to mechanical stimulus IEA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0010494 cytoplasmic stress granule IEA
 cellular_componentGO:0015030 Cajal body IEA
 cellular_componentGO:0016528 sarcoplasm IEA
 cellular_componentGO:0016604 nuclear body IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0030017 sarcomere IEA
 cellular_componentGO:0097504 Gemini of coiled bodies IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Platelet degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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