ENSGALG00000012628


Gallus gallus

Features
Gene ID: ENSGALG00000012628
  
Biological name :HABP4
  
Synonyms : HABP4 / Intracellular hyaluronan-binding protein 4 / Q9I9R0
  
Possible biological names infered from orthology : hyaluronan binding protein 4 / Q5JVS0
  
Species: Gallus gallus
  
Chr. number: Z
Strand: 1
Band:
Gene start: 42179864
Gene end: 42201818
  
Corresponding Affymetrix probe sets: Gga.2855.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000059387
Ensembl peptide - ENSGALP00000020585
NCBI entrez gene - 395444     See in Manteia.
RefSeq - XM_015280241
RefSeq - NM_204705
RefSeq Peptide - NP_990036
swissprot - Q9I9R0
swissprot - A0A1L1RKW8
Ensembl - ENSGALG00000012628
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zgc:103482ENSDARG00000025174Danio rerio
 HABP4ENSG00000130956Homo sapiens
 Habp4ENSMUSG00000021476Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SERBP1 / plasminogen activator inhibitor 1 RNA-binding protein / Q8NC51* / Q9CY58* / SERPINE1 mRNA binding protein 1*ENSGALG0000001122936


Protein motifs (from Interpro)
Interpro ID Name
 IPR006861  Hyaluronan/mRNA-binding protein
 IPR032381  Intracellular hyaluronan-binding protein 4, N-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0033120 positive regulation of RNA splicing IEA
 biological_processGO:0043392 negative regulation of DNA binding IEA
 biological_processGO:0045948 positive regulation of translational initiation IEA
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005730 nucleolus ISS
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0010494 cytoplasmic stress granule ISS
 cellular_componentGO:0015030 Cajal body ISS
 cellular_componentGO:0016528 sarcoplasm IEA
 cellular_componentGO:0016604 nuclear body IEA
 cellular_componentGO:0016607 nuclear speck ISS
 cellular_componentGO:0097504 Gemini of coiled bodies ISS
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
Platelet degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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