ENSGALG00000011229


Gallus gallus

Features
Gene ID: ENSGALG00000011229
  
Biological name :SERBP1
  
Synonyms : plasminogen activator inhibitor 1 RNA-binding protein / SERBP1
  
Possible biological names infered from orthology : Q8NC51 / Q9CY58 / SERPINE1 mRNA binding protein 1
  
Species: Gallus gallus
  
Chr. number: 8
Strand: -1
Band:
Gene start: 28765755
Gene end: 28783828
  
Corresponding Affymetrix probe sets: Gga.2254.1.S1_at (Chicken Array)   Gga.4449.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000018295
Ensembl peptide - ENSGALP00000063046
Ensembl peptide - ENSGALP00000059733
Ensembl peptide - ENSGALP00000047813
Ensembl peptide - ENSGALP00000045838
NCBI entrez gene - 424706     See in Manteia.
RefSeq - XM_015291046
RefSeq - NM_001031293
RefSeq - XM_015291044
RefSeq - XM_015291045
RefSeq Peptide - NP_001026464
swissprot - F1NYE5
swissprot - A0A1L1RW34
swissprot - A0A1L1RLT2
swissprot - A0A1D5P548
swissprot - A0A1D5NZM0
Ensembl - ENSGALG00000011229
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 serbp1aENSDARG00000074242Danio rerio
 serbp1bENSDARG00000087421Danio rerio
 Q8NC51ENSG00000142864Homo sapiens
 Q9CY58ENSMUSG00000036371Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HABP4 / Q9I9R0 / Intracellular hyaluronan-binding protein 4 / Q5JVS0* / hyaluronan binding protein 4*ENSGALG0000001262830


Protein motifs (from Interpro)
Interpro ID Name
 IPR006861  Hyaluronan/mRNA-binding protein
 IPR027205  Plasminogen activator inhibitor 1 RNA-binding protein
 IPR032381  Intracellular hyaluronan-binding protein 4, N-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0003730 mRNA 3"-UTR binding IEA
 molecular_functionGO:0045296 cadherin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr