ENSG00000131378


Homo sapiens

Features
Gene ID: ENSG00000131378
  
Biological name :RFTN1
  
Synonyms : Q14699 / raftlin, lipid raft linker 1 / RFTN1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: p24.3
Gene start: 16313574
Gene end: 16514026
  
Corresponding Affymetrix probe sets: 212646_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000403997
Ensembl peptide - ENSP00000409427
Ensembl peptide - ENSP00000475367
Ensembl peptide - ENSP00000410493
Ensembl peptide - ENSP00000334153
Ensembl peptide - ENSP00000388718
Ensembl peptide - ENSP00000393216
Ensembl peptide - ENSP00000403926
NCBI entrez gene - 23180     See in Manteia.
RefSeq - XM_017006007
RefSeq - XM_005264985
RefSeq - XM_005264986
RefSeq - XM_006713069
RefSeq - XM_011533529
RefSeq - XM_011533530
RefSeq - XM_011533531
RefSeq - XM_017006005
RefSeq - XM_017006006
RefSeq - NM_015150
RefSeq Peptide - NP_055965
swissprot - C9JRN3
swissprot - F8WAR1
swissprot - G3XAJ6
swissprot - C9JHG2
swissprot - Q14699
swissprot - C9JWQ9
swissprot - U3KPZ2
Ensembl - ENSG00000131378
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FQ976914.1ENSDARG00000098654Danio rerio
 rftn1aENSDARG00000070831Danio rerio
 RFTN1ENSGALG00000011241Gallus gallus
 Rftn1ENSMUSG00000039316Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RFTN2 / Q52LD8 / raftlin family member 2ENSG0000016294426


Protein motifs (from Interpro)
Interpro ID Name
 IPR028169  Raftlin family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001765 membrane raft assembly IMP
 biological_processGO:0002457 T cell antigen processing and presentation IEA
 biological_processGO:0032596 protein transport into membrane raft IEA
 biological_processGO:0032620 interleukin-17 production IEA
 biological_processGO:0033227 dsRNA transport IMP
 biological_processGO:0034138 toll-like receptor 3 signaling pathway IMP
 biological_processGO:0040007 growth IMP
 biological_processGO:0043330 response to exogenous dsRNA IMP
 biological_processGO:0050852 T cell receptor signaling pathway IEA
 biological_processGO:0050853 B cell receptor signaling pathway IMP
 biological_processGO:1903044 protein localization to membrane raft IEA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005768 endosome IDA
 cellular_componentGO:0005769 early endosome IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0032991 protein-containing complex IDA
 cellular_componentGO:0045121 membrane raft IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0003725 double-stranded RNA binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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