ENSG00000131848


Homo sapiens

Features
Gene ID: ENSG00000131848
  
Biological name :ZSCAN5A
  
Synonyms : Q9BUG6 / zinc finger and SCAN domain containing 5A / ZSCAN5A
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: -1
Band: q13.43
Gene start: 56219670
Gene end: 56368383
  
Corresponding Affymetrix probe sets: 1565583_at (Human Genome U133 Plus 2.0 Array)   219904_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000468008
Ensembl peptide - ENSP00000468675
Ensembl peptide - ENSP00000468797
Ensembl peptide - ENSP00000375593
Ensembl peptide - ENSP00000464936
Ensembl peptide - ENSP00000466445
Ensembl peptide - ENSP00000466830
Ensembl peptide - ENSP00000467238
Ensembl peptide - ENSP00000467631
NCBI entrez gene - 79149     See in Manteia.
RefSeq - NM_001322066
RefSeq - NM_001322061
RefSeq - NM_001322062
RefSeq - NM_001322064
RefSeq - NM_001322065
RefSeq - NM_001322067
RefSeq - NM_001322068
RefSeq - NM_001322069
RefSeq - NM_001322070
RefSeq - NM_001322072
RefSeq - NM_001322073
RefSeq - NM_001322074
RefSeq - NM_001322075
RefSeq - NM_001322076
RefSeq - NM_001322077
RefSeq - NM_001322078
RefSeq - NM_024303
RefSeq - XM_005259254
RefSeq - XM_006723377
RefSeq - XM_011527308
RefSeq - XM_017027298
RefSeq - XM_017027299
RefSeq Peptide - NP_001309006
RefSeq Peptide - NP_077279
RefSeq Peptide - NP_001308997
RefSeq Peptide - NP_001308998
RefSeq Peptide - NP_001308999
RefSeq Peptide - NP_001309001
RefSeq Peptide - NP_001309002
RefSeq Peptide - NP_001309003
RefSeq Peptide - NP_001309004
RefSeq Peptide - NP_001309005
RefSeq Peptide - NP_001309007
RefSeq Peptide - NP_001308990
RefSeq Peptide - NP_001308991
RefSeq Peptide - NP_001308993
RefSeq Peptide - NP_001308994
RefSeq Peptide - NP_001308995
RefSeq Peptide - NP_001308996
swissprot - Q9BUG6
swissprot - K7ESN6
swissprot - A0A024R4S6
swissprot - A0A0C4DGQ1
swissprot - K7EIX9
swissprot - K7EMC4
swissprot - K7EN85
swissprot - K7EQW6
swissprot - K7ESE4
Ensembl - ENSG00000131848
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Zscan5bENSMUSG00000058028Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
A6NGD5 / ZSCAN5C / zinc finger and SCAN domain containing 5CENSG0000020453284
A6NJL1 / ZSCAN5B / zinc finger and SCAN domain containing 5BENSG0000019721379


Protein motifs (from Interpro)
Interpro ID Name
 IPR003309  SCAN domain
 IPR008916  Retrovirus capsid, C-terminal
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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