ENSG00000132581


Homo sapiens

Features
Gene ID: ENSG00000132581
  
Biological name :SDF2
  
Synonyms : Q99470 / SDF2 / stromal cell derived factor 2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: q11.2
Gene start: 28648356
Gene end: 28662189
  
Corresponding Affymetrix probe sets: 203090_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000247020
Ensembl peptide - ENSP00000466083
Ensembl peptide - ENSP00000466102
NCBI entrez gene - 6388     See in Manteia.
OMIM - 602934
RefSeq - XM_011525106
RefSeq - NM_006923
RefSeq Peptide - NP_008854
swissprot - K7ELH6
swissprot - Q6IBU4
swissprot - Q99470
swissprot - K7ELI9
Ensembl - ENSG00000132581
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sdf2ENSDARG00000024026Danio rerio
 SDF2ENSGALG00000037709Gallus gallus
 Sdf2ENSMUSG00000002064Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9HCN8 / SDF2L1 / stromal cell derived factor 2 like 1ENSG0000012822862


Protein motifs (from Interpro)
Interpro ID Name
 IPR016093  MIR motif
 IPR027005  Glycosyltransferase 39-like
 IPR036300  Mir domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation TAS
 biological_processGO:0035269 protein O-linked mannosylation IEA
 biological_processGO:0071712 ER-associated misfolded protein catabolic process IBA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space TAS
 cellular_componentGO:0005789 endoplasmic reticulum membrane IBA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0004169 dolichyl-phosphate-mannose-protein mannosyltransferase activity TAS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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