ENSG00000133773


Homo sapiens

Features
Gene ID: ENSG00000133773
  
Biological name :CCDC59
  
Synonyms : CCDC59 / coiled-coil domain containing 59 / Q9P031
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: q21.31
Gene start: 82223681
Gene end: 82358805
  
Corresponding Affymetrix probe sets: 218936_s_at (Human Genome U133 Plus 2.0 Array)   222792_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000256151
Ensembl peptide - ENSP00000450183
NCBI entrez gene - 29080     See in Manteia.
RefSeq - NM_014167
RefSeq Peptide - NP_054886
swissprot - F8VNY5
swissprot - Q9P031
Ensembl - ENSG00000133773
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ccdc59ENSDARG00000045755Danio rerio
 CCDC59ENSGALG00000028648Gallus gallus
 Ccdc59ENSMUSG00000019897Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR013730  Fyv7/TAP26


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0044267 cellular protein metabolic process TAS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Surfactant metabolism
Defective pro-SFTPB causes pulmonary surfactant metabolism dysfunction 1 (SMDP1) and respiratory distress syndrome (RDS)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000125482 TTF1 / Q15361 / transcription termination factor 1  / complex / reaction
 ENSG00000168878 SFTPB / P07988 / surfactant protein B  / complex






 

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contact: otassy@igbmc.fr