ENSG00000134419


Homo sapiens

Features
Gene ID: ENSG00000134419
  
Biological name :RPS15A
  
Synonyms : P62244 / ribosomal protein S15a / RPS15A
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: -1
Band: p12.3
Gene start: 18781295
Gene end: 18790383
  
Corresponding Affymetrix probe sets: 200781_s_at (Human Genome U133 Plus 2.0 Array)   229882_at (Human Genome U133 Plus 2.0 Array)   235309_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000459554
Ensembl peptide - ENSP00000460069
Ensembl peptide - ENSP00000460618
Ensembl peptide - ENSP00000318646
Ensembl peptide - ENSP00000457000
Ensembl peptide - ENSP00000457001
Ensembl peptide - ENSP00000457924
Ensembl peptide - ENSP00000458052
Ensembl peptide - ENSP00000458115
Ensembl peptide - ENSP00000458528
Ensembl peptide - ENSP00000459373
NCBI entrez gene - 6210     See in Manteia.
OMIM - 603674
RefSeq - NM_001030009
RefSeq - NM_001019
RefSeq Peptide - NP_001010
RefSeq Peptide - NP_001025180
swissprot - I3L246
swissprot - I3L303
swissprot - I3L3P7
swissprot - B2R4W8
swissprot - P62244
swissprot - H3BT37
swissprot - H3BV27
swissprot - H3BVC7
Ensembl - ENSG00000134419
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rps15aENSDARG00000010160Danio rerio
 RPS15AENSGALG00000006771Gallus gallus
 P62245ENSMUSG00000008683Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q15041 / ARL6IP1 / ADP ribosylation factor like GTPase 6 interacting protein 1ENSG0000017054015
AC138811.2ENSG0000026034214


Protein motifs (from Interpro)
Interpro ID Name
 IPR000630  Ribosomal protein S8
 IPR035987  Ribosomal protein S8 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay TAS
 biological_processGO:0006364 rRNA processing TAS
 biological_processGO:0006412 translation IEA
 biological_processGO:0006413 translational initiation TAS
 biological_processGO:0006614 SRP-dependent cotranslational protein targeting to membrane TAS
 biological_processGO:0008284 positive regulation of cell proliferation IDA
 biological_processGO:0009615 response to virus IDA
 biological_processGO:0019083 viral transcription TAS
 biological_processGO:0045787 positive regulation of cell cycle IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0022627 cytosolic small ribosomal subunit IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0003723 RNA binding NAS
 molecular_functionGO:0003735 structural constituent of ribosome IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
L13a-mediated translational silencing of Ceruloplasmin expression
Peptide chain elongation
SRP-dependent cotranslational protein targeting to membrane
Viral mRNA Translation
Selenocysteine synthesis
Major pathway of rRNA processing in the nucleolus and cytosol
Translation initiation complex formation
Formation of a pool of free 40S subunits
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition
GTP hydrolysis and joining of the 60S ribosomal subunit
Eukaryotic Translation Termination
Regulation of expression of SLITs and ROBOs
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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