ENSG00000135454


Homo sapiens

Features
Gene ID: ENSG00000135454
  
Biological name :B4GALNT1
  
Synonyms : B4GALNT1 / beta-1,4-N-acetyl-galactosaminyltransferase 1 / Q00973
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: q13.3
Gene start: 57623410
Gene end: 57633355
  
Corresponding Affymetrix probe sets: 1555385_at (Human Genome U133 Plus 2.0 Array)   206435_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000450303
Ensembl peptide - ENSP00000449534
Ensembl peptide - ENSP00000473533
Ensembl peptide - ENSP00000341562
Ensembl peptide - ENSP00000401601
Ensembl peptide - ENSP00000446566
Ensembl peptide - ENSP00000447076
Ensembl peptide - ENSP00000447750
Ensembl peptide - ENSP00000447945
Ensembl peptide - ENSP00000448340
Ensembl peptide - ENSP00000448500
Ensembl peptide - ENSP00000448577
NCBI entrez gene - 2583     See in Manteia.
OMIM - 601873
RefSeq - XM_017019142
RefSeq - NM_001276468
RefSeq - NM_001276469
RefSeq - NM_001478
RefSeq - XM_005268773
RefSeq - XM_011538147
RefSeq - XM_011538148
RefSeq - XM_017019140
RefSeq - XM_017019141
RefSeq Peptide - NP_001263398
RefSeq Peptide - NP_001263397
RefSeq Peptide - NP_001469
swissprot - F8VSE0
swissprot - Q00973
swissprot - F8VW33
swissprot - F8W1A7
swissprot - H0YHT1
swissprot - H0YI57
swissprot - F8VU35
swissprot - B4DSP5
swissprot - F8VR44
Ensembl - ENSG00000135454
  
Related genetic diseases (OMIM): 609195 - Spastic paraplegia 26, autosomal recessive, 609195
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 b4galnt1aENSDARG00000061520Danio rerio
 b4galnt1bENSDARG00000077352Danio rerio
 Q09200ENSMUSG00000006731Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8NHY0 / B4GALNT2 / beta-1,4-N-acetyl-galactosaminyltransferase 2ENSG0000016708039


Protein motifs (from Interpro)
Interpro ID Name
 IPR001173  Glycosyltransferase 2-like
 IPR011143  Ganglioside GM2 synthase
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001574 ganglioside biosynthetic process IMP
 biological_processGO:0005975 carbohydrate metabolic process TAS
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006665 sphingolipid metabolic process IEA
 biological_processGO:0006687 glycosphingolipid metabolic process TAS
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0019915 lipid storage IEA
 biological_processGO:0030259 lipid glycosylation IEA
 cellular_componentGO:0000139 Golgi membrane TAS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane TAS
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030173 integral component of Golgi membrane IEA
 molecular_functionGO:0003947 (N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase activity TAS
 molecular_functionGO:0008376 acetylgalactosaminyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0016758 transferase activity, transferring hexosyl groups IEA


Pathways (from Reactome)
Pathway description
Glycosphingolipid metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000079 Abnormality of the urinary tract 
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0001249 Mental retardation 
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 HP:0001265 Hyporeflexia 
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 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
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 HP:0001317 Abnormality of the cerebellum 
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 HP:0001324 Muscle weakness "Reduced strength of muscles." [HPO:curators]
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 HP:0001332 Dystonia "An abnormally increased muscular tone that causes fixed abnormal postures. There is a slow, intermittent twisting motion that leads to exaggerated turning and posture of the extremities and trunk." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001761 Pes cavus 
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 HP:0002061 Lower limb spasticity 
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 HP:0002120 Cerebral cortical atrophy 
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
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 HP:0003487 Babinski sign "Upturning of the big toe (and sometimes fanning of the other toes) in response to stimulation of the sole of the foot. If the Babinski sign is present it can indicate damage to the corticospinal tract." [HPO:curators]
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 HP:0006938 Decreased vibration sense at ankles 
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 HP:0007024 Pseudobulbar paralysis "Bilateral impairment of the function of the cranial nerves 9-12, which control musculature involved in eating, swallowing, and speech. Pseudobulbar paralysis is characterized clinically by dysarthria, dysphonia, and dysphagia with bifacial paralysis, and may be accompanied by `Pseudobulbar behavioral symptoms` (HP:0002193) such as enforced crying and laughing." [HPO:sdoelken]
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 HP:0007141 Sensorimotor neuropathy 
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 HP:0008209 Premature ovarian failure 
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 HP:0030890 Hyperintensity of cerebral white matter on MRI "A brighter than expected signal on magnetic resonance imaging emanating from the cerebral white matter." [PMID:15576652]
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 HP:0040171 Decreased serum testosterone level 
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 HP:0100660 Dyskinesis "A movement disorder which consists of effects including diminished voluntary movements and the presence of involuntary movements." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000135454 Q00973 / B4GALNT1 / beta-1,4-N-acetyl-galactosaminyltransferase 1  / complex






 

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