ENSG00000136213


Homo sapiens

Features
Gene ID: ENSG00000136213
  
Biological name :CHST12
  
Synonyms : carbohydrate sulfotransferase 12 / CHST12 / Q9NRB3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: 1
Band: p22.3
Gene start: 2403560
Gene end: 2448483
  
Corresponding Affymetrix probe sets: 218927_s_at (Human Genome U133 Plus 2.0 Array)   222786_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000411207
Ensembl peptide - ENSP00000481912
Ensembl peptide - ENSP00000258711
NCBI entrez gene - 55501     See in Manteia.
OMIM - 610129
RefSeq - XM_011515444
RefSeq - NM_001243794
RefSeq - NM_001243795
RefSeq - NM_018641
RefSeq - XM_011515443
RefSeq Peptide - NP_001230723
RefSeq Peptide - NP_001230724
RefSeq Peptide - NP_061111
swissprot - C9J991
swissprot - Q9NRB3
swissprot - A0A024R860
Ensembl - ENSG00000136213
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 chst12aENSDARG00000028786Danio rerio
 CHST12ENSGALG00000004276Gallus gallus
 Chst12ENSMUSG00000036599Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CHST11 / Q9NPF2 / carbohydrate sulfotransferase 11ENSG0000017131033
CHST8 / Q9H2A9 / carbohydrate sulfotransferase 8ENSG0000012430231
CHST13 / Q8NET6 / carbohydrate sulfotransferase 13ENSG0000018076728
CHST9 / Q7L1S5 / carbohydrate sulfotransferase 9ENSG0000015408026
CHST14 / Q8NCH0 / carbohydrate sulfotransferase 14ENSG0000016910526
CHST10 / O43529 / carbohydrate sulfotransferase 10ENSG0000011552623


Protein motifs (from Interpro)
Interpro ID Name
 IPR005331  Sulfotransferase
 IPR018011  Carbohydrate sulfotransferase 8-10


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0016051 carbohydrate biosynthetic process IEA
 biological_processGO:0030206 chondroitin sulfate biosynthetic process IDA
 biological_processGO:0030208 dermatan sulfate biosynthetic process IDA
 cellular_componentGO:0000139 Golgi membrane TAS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030173 integral component of Golgi membrane NAS
 molecular_functionGO:0008146 sulfotransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0047756 chondroitin 4-sulfotransferase activity IEA
 molecular_functionGO:0050656 3"-phosphoadenosine 5"-phosphosulfate binding NAS


Pathways (from Reactome)
Pathway description
Chondroitin sulfate biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr