ENSG00000180767


Homo sapiens

Features
Gene ID: ENSG00000180767
  
Biological name :CHST13
  
Synonyms : carbohydrate sulfotransferase 13 / CHST13 / Q8NET6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: q21.3
Gene start: 126524283
Gene end: 126543291
  
Corresponding Affymetrix probe sets: 239647_at (Human Genome U133 Plus 2.0 Array)   242503_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000317404
Ensembl peptide - ENSP00000478416
NCBI entrez gene - 166012     See in Manteia.
OMIM - 610124
RefSeq - NM_152889
RefSeq Peptide - NP_690849
swissprot - A0A087WU70
swissprot - Q8NET6
Ensembl - ENSG00000180767
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CHST13ENSDARG00000004018Danio rerio
 CHST13ENSGALG00000029632Gallus gallus
 Chst13ENSMUSG00000056643Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CHST11 / Q9NPF2 / carbohydrate sulfotransferase 11ENSG0000017131048
CHST8 / Q9H2A9 / carbohydrate sulfotransferase 8ENSG0000012430235
CHST12 / Q9NRB3 / carbohydrate sulfotransferase 12ENSG0000013621334
CHST14 / Q8NCH0 / carbohydrate sulfotransferase 14ENSG0000016910533
CHST9 / Q7L1S5 / carbohydrate sulfotransferase 9ENSG0000015408031
CHST10 / O43529 / carbohydrate sulfotransferase 10ENSG0000011552627


Protein motifs (from Interpro)
Interpro ID Name
 IPR005331  Sulfotransferase
 IPR018011  Carbohydrate sulfotransferase 8-10


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0016051 carbohydrate biosynthetic process IEA
 biological_processGO:0030206 chondroitin sulfate biosynthetic process IDA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0001537 N-acetylgalactosamine 4-O-sulfotransferase activity IDA
 molecular_functionGO:0008146 sulfotransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0047756 chondroitin 4-sulfotransferase activity IEA


Pathways (from Reactome)
Pathway description
Chondroitin sulfate biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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