ENSG00000136271


Homo sapiens

Features
Gene ID: ENSG00000136271
  
Biological name :DDX56
  
Synonyms : DDX56 / DEAD-box helicase 56 / Q9NY93
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: -1
Band: p13
Gene start: 44565417
Gene end: 44575051
  
Corresponding Affymetrix probe sets: 217754_at (Human Genome U133 Plus 2.0 Array)   238525_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000390553
Ensembl peptide - ENSP00000393488
Ensembl peptide - ENSP00000402989
Ensembl peptide - ENSP00000411456
Ensembl peptide - ENSP00000258772
Ensembl peptide - ENSP00000388310
Ensembl peptide - ENSP00000392139
NCBI entrez gene - 54606     See in Manteia.
OMIM - 608023
RefSeq - NM_001257189
RefSeq - NM_019082
RefSeq Peptide - NP_001244118
RefSeq Peptide - NP_061955
swissprot - Q9NY93
swissprot - F8WDT8
swissprot - F8WEI3
swissprot - G3V0G3
swissprot - H7BZN7
swissprot - H7C3E9
Ensembl - ENSG00000136271
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ddx56ENSDARG00000020913Danio rerio
 Ddx56ENSMUSG00000004393Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001650  Helicase, C-terminal
 IPR011545  DEAD/DEAH box helicase domain
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR014014  RNA helicase, DEAD-box type, Q motif
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006364 rRNA processing IBA
 biological_processGO:0010501 RNA secondary structure unwinding IBA
 biological_processGO:0010976 positive regulation of neuron projection development IEA
 biological_processGO:0042254 ribosome biogenesis IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0016020 membrane HDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity TAS
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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