ENSG00000139053


Homo sapiens

Features
Gene ID: ENSG00000139053
  
Biological name :PDE6H
  
Synonyms : PDE6H / phosphodiesterase 6H / Q13956
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: 1
Band: p12.3
Gene start: 14973022
Gene end: 14981865
  
Corresponding Affymetrix probe sets: 206841_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000266395
NCBI entrez gene - 5149     See in Manteia.
OMIM - 601190
RefSeq - NM_006205
RefSeq - XM_017019431
RefSeq Peptide - NP_006196
swissprot - Q13956
Ensembl - ENSG00000139053
  
Related genetic diseases (OMIM): 610024 - Achromatopsia 6, 610024
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PDE6HENSGALG00000025735Gallus gallus
 Pde6hENSMUSG00000064330Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PDE6G / P18545 / phosphodiesterase 6GENSG0000018552781


Protein motifs (from Interpro)
Interpro ID Name
 IPR006952  Retinal cGMP phosphodiesterase, gamma subunit
 IPR037030  Retinal cGMP phosphodiesterase, gamma subunit superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000187 activation of MAPK activity IEA
 biological_processGO:0007601 visual perception TAS
 biological_processGO:0043086 negative regulation of catalytic activity IEA
 biological_processGO:0045742 positive regulation of epidermal growth factor receptor signaling pathway IEA
 biological_processGO:0045745 positive regulation of G-protein coupled receptor protein signaling pathway IEA
 biological_processGO:0050896 response to stimulus IEA
 molecular_functionGO:0004114 3",5"-cyclic-nucleotide phosphodiesterase activity IEA
 molecular_functionGO:0004857 enzyme inhibitor activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0030553 cGMP binding IEA
 molecular_functionGO:0047555 3",5"-cyclic-GMP phosphodiesterase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000505 Impaired vision 
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 HP:0000512 Abnormal electroretinogram "Any abnormality of the electrical responses of various cell types in the retina as measured by electroretinography." [HPO:curators]
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 HP:0000540 Hypermetropia 
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 HP:0000548 Cone-rod dystrophy 
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 HP:0000577 Exotropia 
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 HP:0000603 Central scotoma 
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 HP:0000613 Photophobia "Excessive sensitivity to light with the sensation of discomfort or pain in the eyes due to exposure to bright light." [HPO:curators]
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000662 Night blindness 
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 HP:0007641 Secondary dyschromatopsia 
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 HP:0007663 Decreased central vision 
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 HP:0007722 Loss of retinal pigment epithelium 
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 HP:0007750 Foveal hypoplasia 
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 HP:0007793 Bilateral macular retinal pigment epithelial mottling 
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 HP:0007843 Attenuation of retinal blood vessels 
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 HP:0007939 Almost complete colorblindness except ability to see blue 
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 HP:0008020 Progressive cone degeneration 
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 HP:0012043 Pendular nystagmus "Rhythmic, involuntary sinusoidal oscillations of one or both eyes. The waveform of pendular nystagmus may occur in any direction." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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