ENSG00000185527


Homo sapiens

Features
Gene ID: ENSG00000185527
  
Biological name :PDE6G
  
Synonyms : P18545 / PDE6G / phosphodiesterase 6G
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: q25.3
Gene start: 81650459
Gene end: 81663112
  
Corresponding Affymetrix probe sets: 210060_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000328412
Ensembl peptide - ENSP00000458567
Ensembl peptide - ENSP00000460962
Ensembl peptide - ENSP00000461464
Ensembl peptide - ENSP00000458167
NCBI entrez gene - 5148     See in Manteia.
OMIM - 180073
RefSeq - XM_017024736
RefSeq - NM_002602
RefSeq - XM_006721942
RefSeq - XM_017024734
RefSeq - XM_017024735
RefSeq Peptide - NP_002593
swissprot - I3L446
swissprot - A0A0C4DGN0
swissprot - P18545
Ensembl - ENSG00000185527
  
Related genetic diseases (OMIM): 613582 - Retinitis pigmentosa 57, 613582
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pde6gbENSDARG00000101984Danio rerio
 PDE6GENSGALG00000004514Gallus gallus
 Pde6gENSMUSG00000025386Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PDE6H / Q13956 / phosphodiesterase 6HENSG0000013905377


Protein motifs (from Interpro)
Interpro ID Name
 IPR006952  Retinal cGMP phosphodiesterase, gamma subunit
 IPR037030  Retinal cGMP phosphodiesterase, gamma subunit superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000187 activation of MAPK activity IEA
 biological_processGO:0007223 Wnt signaling pathway, calcium modulating pathway TAS
 biological_processGO:0007601 visual perception TAS
 biological_processGO:0016056 rhodopsin mediated signaling pathway TAS
 biological_processGO:0022400 regulation of rhodopsin mediated signaling pathway TAS
 biological_processGO:0043086 negative regulation of catalytic activity IEA
 biological_processGO:0045742 positive regulation of epidermal growth factor receptor signaling pathway IEA
 biological_processGO:0045745 positive regulation of G-protein coupled receptor protein signaling pathway IEA
 biological_processGO:0050896 response to stimulus IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0097381 photoreceptor disc membrane TAS
 molecular_functionGO:0004114 3",5"-cyclic-nucleotide phosphodiesterase activity IEA
 molecular_functionGO:0004857 enzyme inhibitor activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0030507 spectrin binding IEA
 molecular_functionGO:0030553 cGMP binding IEA
 molecular_functionGO:0047555 3",5"-cyclic-GMP phosphodiesterase activity IEA


Pathways (from Reactome)
Pathway description
Activation of the phototransduction cascade
Inactivation, recovery and regulation of the phototransduction cascade
Ca2+ pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000035 Abnormality of the testis 
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 HP:0000135 Hypogonadism "Reduced function of the gonads (testes in males or ovaries in females)." [HPO:curators]
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 HP:0000405 Hearing loss, conductive 
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000431 Broad nasal bridge "Increased horizontal dimension of the upper, bony part of the nose." [HPO:curators]
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000501 Glaucoma "Glaucoma refers loss of retinal ganglion cells in a characteristic pattern of optic neuropathy usually associated with increased intraocular pressure." [HPO:curators]
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 HP:0000510 Retinitis pigmentosa "Hereditary degeneration and atrophy of the retina." [HPO:curators]
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 HP:0000512 Abnormal electroretinogram "Any abnormality of the electrical responses of various cell types in the retina as measured by electroretinography." [HPO:curators]
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000543 Pale optic disks 
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 HP:0000563 Keratoconus "A cone-shaped deformity of the cornea." [HPO:curators]
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 HP:0000602 Ophthalmoplegia 
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 HP:0000613 Photophobia "Excessive sensitivity to light with the sensation of discomfort or pain in the eyes due to exposure to bright light." [HPO:curators]
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 HP:0000618 Blindness 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000648 Optic atrophy 
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 HP:0000662 Night blindness 
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 HP:0000842 Hyperinsulinemia 
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 HP:0000987 Scarring 
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 HP:0001133 Constricted visual fields 
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 HP:0001249 Mental retardation 
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001513 Obesity "A status with BODY WEIGHT that is grossly above the acceptable or desirable weight, usually due to accumulation of excess FATS in the body. The standards may vary with age, sex, genetic or cultural background. In the BODY MASS INDEX, a BMI greater than 30.0 kg/m2 is considered obese, and a BMI greater than 40.0 kg/m2 is considered morbidly obese (MORBID OBESITY)." [MeSH:D009765]
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 HP:0005978 Noninsulin-dependent diabetes mellitus 
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 HP:0007675 Progressive night blindness 
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 HP:0007703 Abnormal retinal pigmentation 
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 HP:0007843 Attenuation of retinal blood vessels 
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 HP:0008046 Abnormality of the retinal vasculature 
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 HP:0008736 Hypoplasia of penis 
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 HP:0011505 Cystoid macular edema "Cystoid macular edema (CME) is any type of macular edema that involves cyst formation." [DDD:ncarter]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000133256 PDE6B / P35913 / phosphodiesterase 6B  / complex
 ENSG00000132915 PDE6A / P16499 / phosphodiesterase 6A  / complex
 ENSG00000114349 GNAT1 / P11488 / G protein subunit alpha transducin 1  / complex / reaction
 ENSG00000185527 PDE6G / P18545 / phosphodiesterase 6G  / complex
 ENSG00000134183 GNAT2 / P19087 / G protein subunit alpha transducin 2  / reaction / complex






 

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