ENSDARG00000101984


Danio rerio

Features
Gene ID: ENSDARG00000101984
  
Biological name :pde6gb
  
Synonyms : pde6gb / phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b
  
Possible biological names infered from orthology : P09174 / P18545 / PDE6G / phosphodiesterase 6G / phosphodiesterase 6G, cGMP-specific, rod, gamma
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 35980541
Gene end: 35988586
  
Corresponding Affymetrix probe sets: Dr.9829.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000134212
NCBI entrez gene - 554700     See in Manteia.
RefSeq - NM_001243082
RefSeq Peptide - NP_001230011
RefSeq Peptide - NP_997964
swissprot - Q7ZVI5
ZFIN ID - ZDB-GENE-030904-1
Ensembl - ENSDARG00000101984
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PDE6GENSGALG00000004514Gallus gallus
 PDE6GENSG00000185527Homo sapiens
 Pde6gENSMUSG00000025386Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pde6ga / phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog aENSDARG0000005679172
CR394572.1ENSDARG0000011526861
pde6ha / phosphodiesterase 6H, cGMP-specific, cone, gamma, paralog aENSDARG0000010255859


Protein motifs (from Interpro)
Interpro ID Name
 IPR006952  Retinal cGMP phosphodiesterase, gamma subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007601 visual perception IEA
 molecular_functionGO:0004114 3",5"-cyclic-nucleotide phosphodiesterase activity IEA
 molecular_functionGO:0030553 cGMP binding IEA


Pathways (from Reactome)
Pathway description
Activation of the phototransduction cascade
Inactivation, recovery and regulation of the phototransduction cascade
Ca2+ pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000000380 pde6a / phosphodiesterase 6A, cGMP-specific, rod, alpha / P16499* / phosphodiesterase 6A*  / complex
 ENSDARG00000044199 gnat1 / guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 / P20612* / P11488* / G protein subunit alpha transducin 1* / guanine nucleotide binding pro...  / complex
 ENSDARG00000042529 gnat2 / guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 / P50149* / P19087* / G protein subunit alpha transducin 2* / guanine nucleotide binding pro...  / complex
 ENSDARG00000011671 pde6b / phosphodiesterase 6B, cGMP-specific, rod, beta / P35913* / P23440* / phosphodiesterase 6B* / phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide*  / complex
 ENSDARG00000101984 pde6gb / phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b / PDE6G* / P18545* / phosphodiesterase 6G*  / complex






 

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