ENSDARG00000000380
Danio rerio | |
Features
| Gene ID: | ENSDARG00000000380 | | | | | Biological name : | pde6a | | | | | Synonyms : | pde6a / phosphodiesterase 6A, cGMP-specific, rod, alpha | | | | | Possible biological names infered from orthology : | P16499 / phosphodiesterase 6A | | | | | Species: | Danio rerio | | | | | Chr. number: | 14 | | Strand: | -1 | | Band: | | | Gene start: | 25005403 | | Gene end: | 25035010 | | | | | Corresponding Affymetrix probe sets: | Dr.9853.1.A1_at (Zebrafish Array) NM_001007160_at (Zebrafish Genome Array with custom cdf files) | | | | | Cross references: | Ensembl peptide - ENSDARP00000000392
Ensembl peptide - ENSDARP00000156300
NCBI entrez gene - 368410
See in Manteia.
RefSeq - NM_001007160
RefSeq Peptide - NP_001007161
swissprot - Q800E7
ZFIN ID - ZDB-GENE-030616-42
Ensembl - ENSDARG00000000380
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See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed
Ortholog prediction (from Ensembl)
Paralog prediction (from Ensembl)
| pde6b / phosphodiesterase 6B, cGMP-specific, rod, beta / P35913* / P23440* / phosphodiesterase 6B* / phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide* | ENSDARG00000011671 | 72 | | pde6c / phosphodiesterase 6C, cGMP-specific, cone, alpha prime / P51160* / Q91ZQ1* / phosphodiesterase 6C* / Cone cGMP-specific 3,5-cyclic phosphodiesterase subunit alpha * | ENSDARG00000100397 | 60 | | pde11a / phosphodiesterase 11a / P0C1Q2* / Q9HCR9* / Dual 3,5-cyclic-AMP and -GMP phosphodiesterase 11A * | ENSDARG00000063732 | 32 | | pde11al / phosphodiesterase 11a, like | ENSDARG00000006151 | 31 | | pde5ab / phosphodiesterase 5A, cGMP-specific, b / PDE5A* / Q8CG03* / O76074* / phosphodiesterase 5A* / cGMP-specific 3,5-cyclic phosphodiesterase * | ENSDARG00000051915 | 28 | | pde10a / phosphodiesterase 10A / Q8CA95* / Q9Y233* | ENSDARG00000003449 | 23 | | pde3a / phosphodiesterase 3A, cGMP-inhibited / Q14432* / Q9Z0X4* / phosphodiesterase 3A* | ENSDARG00000004227 | 18 | | PDE3B / si:ch211-79e4.4 / Q13370* / phosphodiesterase 3B* | ENSDARG00000062190 | 16 | | FQ378016.1 / PDE9A* / O76083* / phosphodiesterase 9A* | ENSDARG00000108939 | 15 | | pde9a / phosphodiesterase 9A / O70628* / O76083* / High affinity cGMP-specific 3,5-cyclic phosphodiesterase 9A * | ENSDARG00000060280 | 15 | | pde9al / phosphodiesterase 9A like / PDE9A* / O76083* / phosphodiesterase 9A* | ENSDARG00000076650 | 15 | | si:dkey-219c10.4 | ENSDARG00000075929 | 11 | | pde5aa / phosphodiesterase 5A, cGMP-specific, a | ENSDARG00000056806 | 7 | | CABZ01079080.1 / PDE2A* / O00408* / phosphodiesterase 2A* | ENSDARG00000079064 | 4 |
Protein motifs (from Interpro)
| IPR002073 | 3"5"-cyclic nucleotide phosphodiesterase, catalytic domain | | IPR003018 | GAF domain | | IPR003607 | HD/PDEase domain | | IPR023088 | 3"5"-cyclic nucleotide phosphodiesterase | | IPR023174 | 3"5"-cyclic nucleotide phosphodiesterase, conserved site | | IPR029016 | GAF-like domain superfamily |
Gene Ontology (GO)
Pathways (from Reactome)
Phenotype (from MGI, Zfin or HPO)
No match
Interacting proteins (from Reactome)
| ENSDARG00000042529 | gnat2 / guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 / P50149* / P19087* / G protein subunit alpha transducin 2* / guanine nucleotide binding pro... | / complex | | ENSDARG00000101984 | pde6gb / phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b / PDE6G* / P18545* / phosphodiesterase 6G* | / complex | | ENSDARG00000044199 | gnat1 / guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 / P20612* / P11488* / G protein subunit alpha transducin 1* / guanine nucleotide binding pro... | / complex | | ENSDARG00000011671 | pde6b / phosphodiesterase 6B, cGMP-specific, rod, beta / P35913* / P23440* / phosphodiesterase 6B* / phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide* | / complex |
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