ENSDARG00000056791


Danio rerio

Features
Gene ID: ENSDARG00000056791
  
Biological name :pde6ga
  
Synonyms : pde6ga / phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog a
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 19460991
Gene end: 19466015
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000134263
NCBI entrez gene - 553708     See in Manteia.
RefSeq - NM_001159826
RefSeq Peptide - NP_001153298
swissprot - Q502C6
ZFIN ID - ZDB-GENE-050522-144
Ensembl - ENSDARG00000056791
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pde6gb / phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b / PDE6G* / P18545* / phosphodiesterase 6G*ENSDARG0000010198473
CR394572.1ENSDARG0000011526858
pde6ha / phosphodiesterase 6H, cGMP-specific, cone, gamma, paralog aENSDARG0000010255855


Protein motifs (from Interpro)
Interpro ID Name
 IPR006952  Retinal cGMP phosphodiesterase, gamma subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007601 visual perception IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0004114 3",5"-cyclic-nucleotide phosphodiesterase activity IEA
 molecular_functionGO:0030553 cGMP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr