ENSDARG00000102558


Danio rerio

Features
Gene ID: ENSDARG00000102558
  
Biological name :pde6ha
  
Synonyms : pde6ha / phosphodiesterase 6H, cGMP-specific, cone, gamma, paralog a
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 344423
Gene end: 346084
  
Corresponding Affymetrix probe sets: Dr.10293.2.S1_at (Zebrafish Array)   Dr.10293.2.S1_a_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000136130
Ensembl peptide - ENSDARP00000136568
NCBI entrez gene - 393758     See in Manteia.
NCBI entrez gene - 110437775     See in Manteia.
RefSeq - NM_200785
RefSeq - NM_001305554
RefSeq Peptide - NP_001292483
RefSeq Peptide - NP_957079
swissprot - Q6PBP4
ZFIN ID - ZDB-GENE-040426-1754
Ensembl - ENSDARG00000102558
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pde6gb / phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b / PDE6G* / P18545* / phosphodiesterase 6G*ENSDARG0000010198470
pde6ga / phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog aENSDARG0000005679164
CR394572.1ENSDARG0000011526858


Protein motifs (from Interpro)
Interpro ID Name
 IPR006952  Retinal cGMP phosphodiesterase, gamma subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007601 visual perception IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0004114 3",5"-cyclic-nucleotide phosphodiesterase activity IEA
 molecular_functionGO:0030553 cGMP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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