ENSG00000140650


Homo sapiens

Features
Gene ID: ENSG00000140650
  
Biological name :PMM2
  
Synonyms : O15305 / phosphomannomutase 2 / PMM2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: 1
Band: p13.2
Gene start: 8788823
Gene end: 8849331
  
Corresponding Affymetrix probe sets: 203201_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000456961
Ensembl peptide - ENSP00000457956
Ensembl peptide - ENSP00000457932
Ensembl peptide - ENSP00000268261
Ensembl peptide - ENSP00000454284
Ensembl peptide - ENSP00000454395
Ensembl peptide - ENSP00000455066
Ensembl peptide - ENSP00000455320
Ensembl peptide - ENSP00000456024
Ensembl peptide - ENSP00000456275
Ensembl peptide - ENSP00000456302
Ensembl peptide - ENSP00000456774
NCBI entrez gene - 5373     See in Manteia.
OMIM - 601785
RefSeq - NM_000303
RefSeq - XM_005255374
RefSeq Peptide - NP_000294
swissprot - H3BR08
swissprot - H3BRM0
swissprot - A0A0S2Z4J6
swissprot - H3BV34
swissprot - H3BV55
swissprot - O15305
swissprot - H3BT06
swissprot - H3BM92
swissprot - H3BNY9
swissprot - H3BPH4
Ensembl - ENSG00000140650
  
Related genetic diseases (OMIM): 212065 - Congenital disorder of glycosylation, type Ia, 212065
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pmm2ENSDARG00000037654Danio rerio
 PMM2ENSGALG00000007326Gallus gallus
 Pmm2ENSMUSG00000022711Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PMM1 / Q92871 / phosphomannomutase 1ENSG0000010041763


Protein motifs (from Interpro)
Interpro ID Name
 IPR005002  Phosphomannomutase
 IPR006379  HAD-superfamily hydrolase, subfamily IIB
 IPR023214  HAD superfamily
 IPR036412  HAD-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006013 mannose metabolic process IBA
 biological_processGO:0006486 protein glycosylation TAS
 biological_processGO:0006487 protein N-linked glycosylation IBA
 biological_processGO:0009298 GDP-mannose biosynthetic process IEA
 biological_processGO:0045047 protein targeting to ER IBA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IBA
 cellular_componentGO:0043025 neuronal cell body IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0004615 phosphomannomutase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016853 isomerase activity IEA


Pathways (from Reactome)
Pathway description
Defective PMM2 causes PMM2-CDG (CDG-1a)
Synthesis of GDP-mannose


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000093 Proteinuria 
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 HP:0000100 Nephrotic syndrome 
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 HP:0000107 Renal cysts 
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 HP:0000114 Proximal renal tubule defect 
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 HP:0000219 Thin upper lip 
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000400 Large ears 
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 HP:0000510 Retinitis pigmentosa "Hereditary degeneration and atrophy of the retina." [HPO:curators]
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 HP:0000565 Esotropia 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000815 Hypergonadotropic hypogonadism "Reduced function of the gonads (testes in males or ovaries in females) associated with excess pituitary gonadotropin secretion and resulting in delayed sexual development and growth delay." [HPO:curators]
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 HP:0000821 Hypothyroidism 
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 HP:0000938 Osteopenia "Osteopenia refers to a reduction in bone mineral density (BMD) below normal peak BMD but not low enough to be classified as osteoporosis. According to the WHO, osteopenia is characterized by a value of BMD more than 1 standard deviation below the young adult mean, but less than 2 standard deviations below this value." [HPO:curators]
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001265 Hyporeflexia 
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 HP:0001271 Polyneuropathy "A generalized disorder of peripheral nerves." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001324 Muscle weakness "Reduced strength of muscles." [HPO:curators]
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 HP:0001371 Contractures 
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 HP:0001395 Hepatic fibrosis 
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 HP:0001397 Hepatic steatosis 
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 HP:0001508 Failure to thrive 
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 HP:0001560 Abnormality of the amniotic fluid "Abnormality of the amniotic fluid, which is the fluid contained in the amniotic sac surrounding the developing fetus." [HPO:curators]
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 HP:0001638 Cardiomyopathy 
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 HP:0001698 Pericardial effusion 
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 HP:0001790 Nonimmune hydrops fetalis 
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 HP:0001894 Thrombocytosis 
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 HP:0001929 Factor XI deficiency 
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 HP:0001976 Antithrombin III deficiency 
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 HP:0002013 Vomiting 
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 HP:0002014 Diarrhea 
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002401 Stroke-like episodes 
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 HP:0002720 Decreased IgA 
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 HP:0002808 Kyphosis 
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 HP:0002910 Elevated transaminases "Elevations of the levels of SGOT and SGPT in the serum. SGOT (serum glutamic oxaloacetic transaminase) and SGPT (serum glutamic pyruvic transaminase) are transaminases primarily found in the liver and heart and are released into the bloodstream as the result of liver or heart damage. SGOT and SGPT are used clinically mainly as markers of liver damage." [HPO:curators]
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 HP:0003073 Hypoalbuminemia "Reduction in the concentration of albumin in the blood." [HPO:curators]
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 HP:0003146 Hypocholesterolemia 
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 HP:0003186 Inverted nipples "The presence of nipples that instead of pointing outward are retracted inwards." [HPO:sdoelken]
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 HP:0003642 Abnormal isoelectric focusing of serum transferrin (type 1 pattern) 
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 HP:0003645 Prolonged partial thromboplastin time 
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 HP:0004315 Decreased IgG level "An abnormally decreased level of immunoglobulin G in blood." [HPO:probinson]
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0006955 Olivopontocerebellar hypoplasia 
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 HP:0007552 Abnormal subcutaneous fat tissue distribution 
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 HP:0008151 Prolonged prothrombin and partial thromboplastin times 
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 HP:0008209 Premature ovarian failure 
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 HP:0008872 Feeding problems in infancy 
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 HP:0011220 Prominent forehead "Forward prominence of the entire forehead, due to protrusion of the frontal bone." [pmid:19125436]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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