ENSG00000140830


Homo sapiens

Features
Gene ID: ENSG00000140830
  
Biological name :TXNL4B
  
Synonyms : Q9NX01 / thioredoxin like 4B / TXNL4B
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: -1
Band: q22.2
Gene start: 72044289
Gene end: 72094431
  
Corresponding Affymetrix probe sets: 218794_s_at (Human Genome U133 Plus 2.0 Array)   222748_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000457699
Ensembl peptide - ENSP00000454635
Ensembl peptide - ENSP00000455550
Ensembl peptide - ENSP00000268483
Ensembl peptide - ENSP00000392310
Ensembl peptide - ENSP00000408130
NCBI entrez gene - 54957     See in Manteia.
OMIM - 617722
RefSeq - XM_017023377
RefSeq - NM_001142317
RefSeq - NM_001142318
RefSeq - NM_001324354
RefSeq - NM_001324355
RefSeq - NM_017853
RefSeq Peptide - NP_001135790
RefSeq Peptide - NP_001311283
RefSeq Peptide - NP_001311284
RefSeq Peptide - NP_060323
RefSeq Peptide - NP_001135789
swissprot - H3BQ09
swissprot - H3BN11
swissprot - Q9NX01
swissprot - H3BUL8
Ensembl - ENSG00000140830
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 txnl4bENSDARG00000058962Danio rerio
 TXNL4BENSGALG00000015327Gallus gallus
 Q8BUH1ENSMUSG00000031723Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P83876 / TXNL4A / thioredoxin like 4AENSG0000014175933


Protein motifs (from Interpro)
Interpro ID Name
 IPR004123  Dim1 family
 IPR036249  Thioredoxin-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000245 spliceosomal complex assembly IBA
 biological_processGO:0000398 mRNA splicing, via spliceosome IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005681 spliceosomal complex IBA
 cellular_componentGO:0005682 U5 snRNP IBA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0046540 U4/U6 x U5 tri-snRNP complex IBA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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