ENSG00000141759


Homo sapiens

Features
Gene ID: ENSG00000141759
  
Biological name :TXNL4A
  
Synonyms : P83876 / thioredoxin like 4A / TXNL4A
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 18
Strand: -1
Band: q23
Gene start: 79970811
Gene end: 80033949
  
Corresponding Affymetrix probe sets: 1555461_at (Human Genome U133 Plus 2.0 Array)   202835_at (Human Genome U133 Plus 2.0 Array)   202836_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000468493
Ensembl peptide - ENSP00000465493
Ensembl peptide - ENSP00000465321
Ensembl peptide - ENSP00000347678
Ensembl peptide - ENSP00000269601
Ensembl peptide - ENSP00000465572
Ensembl peptide - ENSP00000468761
Ensembl peptide - ENSP00000466266
Ensembl peptide - ENSP00000466694
Ensembl peptide - ENSP00000467304
NCBI entrez gene - 10907     See in Manteia.
OMIM - 611595
RefSeq - NM_006701
RefSeq - NM_001303471
RefSeq - NM_001305557
RefSeq - NM_001305563
RefSeq - NM_001305564
RefSeq Peptide - NP_001290400
RefSeq Peptide - NP_006692
RefSeq Peptide - NP_001292493
RefSeq Peptide - NP_001292492
RefSeq Peptide - NP_001292486
swissprot - P83876
swissprot - K7EJU2
swissprot - K7EMX5
swissprot - K7EPA6
swissprot - K7ES07
swissprot - K7ESL1
swissprot - O14835
Ensembl - ENSG00000141759
  
Related genetic diseases (OMIM): 608572 - Burn-McKeown syndrome, 608572
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 P83877ENSMUSG00000057130Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9NX01 / TXNL4B / thioredoxin like 4BENSG0000014083035


Protein motifs (from Interpro)
Interpro ID Name
 IPR004123  Dim1 family
 IPR036249  Thioredoxin-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000245 spliceosomal complex assembly TAS
 biological_processGO:0000375 RNA splicing, via transesterification reactions TAS
 biological_processGO:0000398 mRNA splicing, via spliceosome IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0051301 cell division IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0005682 U5 snRNP IBA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0031965 nuclear membrane IDA
 cellular_componentGO:0046540 U4/U6 x U5 tri-snRNP complex IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway
mRNA Splicing - Minor Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000089 Renal hypoplasia 
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 HP:0000160 Microstomia "The presence of an abnormally small `mouth` (FMA:49184)." [HPO:curators]
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 HP:0000174 Abnormality of palate "Any abnormality of the `palate` (FMA:54549), i.e., of roof of the mouth)." [HPO:probinson]
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 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
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 HP:0000193 Bifid uvula "A split or cleft uvula." [HPO:curators]
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 HP:0000204 Cleft lip "A gap in the `upper lip` (FMA:59817). This is a congenital defect resulting from nonfusion of tissues of the lip during embryonal development." [HPO:probinson]
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 HP:0000233 Thin vermillion border 
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 HP:0000303 Mandibular prognathia "Abnormal prominence of the chin related to an abnormally long mandible." [HPO:curators]
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 HP:0000316 Hypertelorism 
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 HP:0000322 Short philtrum 
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 HP:0000338 Hypomimic face 
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000384 Preauricular skin tag "A rudimentary tag of ear tissue often containing a core of cartilage and located just in front of the auricle (outer part of the ear)." [HPO:curators]
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 HP:0000405 Hearing loss, conductive 
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 HP:0000411 Protruding ears 
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 HP:0000426 Prominent nasal bridge 
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 HP:0000430 Hypoplastic nasal alae "Thinned, deficient, or excessively arched `ala nasi` (FMA:59519)." [pmid:19152422]
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 HP:0000431 Broad nasal bridge "Increased horizontal dimension of the upper, bony part of the nose." [HPO:curators]
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 HP:0000504 Abnormality of vision "Abnormality of eyesight (visual perception)." [HPO:curators]
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 HP:0000581 Blepharophimosis "Reduced width of the palpebral fissures." [HPO:sdoelken]
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 HP:0000652 Lower eyelid coloboma "A `coloboma` (HP:0000589) of the `lower eyelid` (FMA:54442)." [HPO:probinson]
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 HP:0001629 Ventricular septal defect "A hole between the two bottom chambers (ventricles) of the heart. The defect is centered around the most superior aspect of the ventricular septum." [HPO:curators]
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 HP:0001631 Atrial septal defect "Atrial septal defect (ASD) is a congenital heart defect that enables blood flow between the left and right atria via the interatrial septum. The three common types of ASD are sinus venosus defects, ostium secundum defects, and ostium primum defects." [HPO:curators]
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 HP:0001671 Abnormality of the cardiac septa 
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 HP:0001939 Metabolism abnormality 
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 HP:0003196 Nasal hypoplasia "Underdevelopment of the `nose` (FMA:46472)." [HPO:probinson]
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0004502 Bilateral choanal atresia/stenosis "Bilateral absence (atresia) or abnormal narrowing (stenosis) of the choana (the posterior nasal aperture)." [HPO:curators]
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 HP:0004691 2-3 toe syndactyly "`Syndactyly` (HP:0001159) with fusion of toes two and three." [HPO:sdoelken]
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 HP:0008872 Feeding problems in infancy 
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 HP:0012745 Short palpebral fissure "Distance between the medial and lateral canthi is more than 2 SD below the mean for age (objective); or, apparently reduced length of the palpebral fissures." [pmid:19125427]
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 HP:0200138 Bilateral choanal atresia/stenosis 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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