ENSMUSG00000057130


Mus musculus

Features
Gene ID: ENSMUSG00000057130
  
Biological name :Txnl4a
  
Synonyms : P83877 / thioredoxin-like 4A / Txnl4a
  
Possible biological names infered from orthology : P83876
  
Species: Mus musculus
  
Chr. number: 18
Strand: 1
Band: E3
Gene start: 80206795
Gene end: 80223533
  
Corresponding Affymetrix probe sets: 10456995 (MoGene1.0st)   1419179_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000025464
Ensembl peptide - ENSMUSP00000115320
NCBI entrez gene - 27366     See in Manteia.
MGI - MGI:1351613
RefSeq - XM_017317914
RefSeq - NM_025299
RefSeq - XM_006526487
RefSeq Peptide - NP_079575
swissprot - P83877
swissprot - F8WGE7
Ensembl - ENSMUSG00000057130
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 P83876ENSG00000141759Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8BUH1 / Txnl4b / thioredoxin-like 4B / Q9NX01*ENSMUSG0000003172335


Protein motifs (from Interpro)
Interpro ID Name
 IPR004123  Dim1 family
 IPR036249  Thioredoxin-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000245 spliceosomal complex assembly IBA
 biological_processGO:0000398 mRNA splicing, via spliceosome IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0051301 cell division IEA
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0005682 U5 snRNP TAS
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0031965 nuclear membrane IEA
 cellular_componentGO:0046540 U4/U6 x U5 tri-snRNP complex IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway
mRNA Splicing - Minor Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr