ENSG00000141956


Homo sapiens

Features
Gene ID: ENSG00000141956
  
Biological name :PRDM15
  
Synonyms : P57071 / PRDM15 / PR/SET domain 15
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 21
Strand: -1
Band: q22.3
Gene start: 41798225
Gene end: 41879482
  
Corresponding Affymetrix probe sets: 230553_at (Human Genome U133 Plus 2.0 Array)   230777_s_at (Human Genome U133 Plus 2.0 Array)   231931_at (Human Genome U133 Plus 2.0 Array)   234524_at (Human Genome U133 Plus 2.0 Array)   236061_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000415471
Ensembl peptide - ENSP00000408592
Ensembl peptide - ENSP00000431410
Ensembl peptide - ENSP00000269844
Ensembl peptide - ENSP00000381556
Ensembl peptide - ENSP00000387958
Ensembl peptide - ENSP00000390245
Ensembl peptide - ENSP00000396943
NCBI entrez gene - 63977     See in Manteia.
OMIM - 617692
RefSeq - XM_017028426
RefSeq - NM_001040424
RefSeq - NM_001282934
RefSeq - NM_022115
RefSeq - XM_011529677
RefSeq - XM_011529678
RefSeq - XM_011529679
RefSeq - XM_011529681
RefSeq - XM_011529683
RefSeq - XM_017028425
RefSeq - XM_006724039
RefSeq - XM_006724040
RefSeq - XM_011529674
RefSeq - XM_011529675
RefSeq - XM_011529676
RefSeq Peptide - NP_001035514
RefSeq Peptide - NP_001269863
RefSeq Peptide - NP_071398
swissprot - P57071
swissprot - Q4W8S1
swissprot - E7ER26
Ensembl - ENSG00000141956
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PRDM15ENSDARG00000098867Danio rerio
 PRDM15ENSGALG00000019178Gallus gallus
 Prdm15ENSMUSG00000014039Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PRDM10 / Q9NQV6 / PR/SET domain 10ENSG0000017032517


Protein motifs (from Interpro)
Interpro ID Name
 IPR001214  SET domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR026939  At2g23090-like
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0032259 methylation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0016604 nuclear body IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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