ENSG00000170325


Homo sapiens

Features
Gene ID: ENSG00000170325
  
Biological name :PRDM10
  
Synonyms : PRDM10 / PR/SET domain 10 / Q9NQV6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: -1
Band: q24.3
Gene start: 129899706
Gene end: 130002835
  
Corresponding Affymetrix probe sets: 214158_s_at (Human Genome U133 Plus 2.0 Array)   219515_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000431262
Ensembl peptide - ENSP00000436681
Ensembl peptide - ENSP00000435940
Ensembl peptide - ENSP00000432237
Ensembl peptide - ENSP00000432093
Ensembl peptide - ENSP00000302669
Ensembl peptide - ENSP00000351686
Ensembl peptide - ENSP00000354118
Ensembl peptide - ENSP00000398431
NCBI entrez gene - 56980     See in Manteia.
RefSeq - XM_017018023
RefSeq - NM_020228
RefSeq - NM_199437
RefSeq - NM_199438
RefSeq - NM_199439
RefSeq - XM_011542912
RefSeq Peptide - NP_955469
RefSeq Peptide - NP_064613
RefSeq Peptide - NP_955470
RefSeq Peptide - NP_955471
swissprot - E9PIB4
swissprot - E9PRS0
swissprot - E9PS52
swissprot - Q9NQV6
swissprot - E9PLV1
Ensembl - ENSG00000170325
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 prdm10ENSDARG00000104251Danio rerio
 ENSGALG00000033660Gallus gallus
 Prdm10ENSMUSG00000042496Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P57071 / PRDM15 / PR/SET domain 15ENSG0000014195622


Protein motifs (from Interpro)
Interpro ID Name
 IPR001214  SET domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR022755  Zinc finger, double-stranded RNA binding
 IPR026939  At2g23090-like
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0032259 methylation IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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